The emergence of valency in colloidal crystals through electron equivalents

S Wang, S Lee, JS Du, BE Partridge, HF Cheng… - Nature materials, 2022 - nature.com
Colloidal crystal engineering of complex, low-symmetry architectures is challenging when
isotropic building blocks are assembled. Here we describe an approach to generating such …

HOOMD-blue: A Python package for high-performance molecular dynamics and hard particle Monte Carlo simulations

JA Anderson, J Glaser, SC Glotzer - Computational Materials Science, 2020 - Elsevier
HOOMD-blue is a particle simulation engine designed for nano-and colloidal-scale
molecular dynamics and hard particle Monte Carlo simulations. It has been actively …

A Zn‐dependent structural transition of SOD1 modulates its ability to undergo phase separation

B Das, S Roychowdhury, P Mohanty, A Rizuan… - The EMBO …, 2023 - embopress.org
The misfolding and mutation of Cu/Zn superoxide dismutase (SOD1) is commonly
associated with amyotrophic lateral sclerosis (ALS). SOD1 can accumulate within stress …

Self-Assembly of Atomically Aligned Nanoparticle Superlattices from Pt–Fe3O4 Heterodimer Nanoparticles

S Yang, RA LaCour, YY Cai, J Xu… - Journal of the …, 2023 - ACS Publications
Multicomponent nanoparticle superlattices (SLs) promise the integration of nanoparticles
(NPs) with remarkable electronic, magnetic, and optical properties into a single structure …

Nanocrystal programmable assembly beyond hard spheres (or shapes) and other (simple) potentials

A Travesset - Current Opinion in Solid State and Materials Science, 2024 - Elsevier
Ligands are the key to almost any strategy in the assembly of programmable nanocrystals
(or nanoparticles) and must be accurately considered in any predictive model. Hard Spheres …

Programming patchy particles for materials assembly design

EM King, CX Du, QZ Zhu, SS Schoenholz… - Proceedings of the …, 2024 - pnas.org
Direct design of complex functional materials would revolutionize technologies ranging from
printable organs to novel clean energy devices. However, even incremental steps toward …

Molecular interactions underlying the phase separation of HP1α: role of phosphorylation, ligand and nucleic acid binding

C Her, TM Phan, N Jovic, U Kapoor… - Nucleic Acids …, 2022 - academic.oup.com
Heterochromatin protein 1α (HP1α) is a crucial element of chromatin organization. It has
been proposed that HP1α functions through liquid-liquid phase separation (LLPS), which …

Ligand Effects in Assembly of Cubic and Spherical Nanocrystals: Applications to Packing of Perovskite Nanocubes

J Hallstrom, I Cherniukh, X Zha, MV Kovalenko… - ACS …, 2023 - ACS Publications
We establish the formula representing cubic nanocrystals (NCs) as hard cubes taking into
account the role of the ligands and describe how these results generalize to any other NC …

High-Precision Calculation of Nanoparticle (Nanocrystal) Potentials of Mean Force and Internal Energies

A Upah, A Thomas, J Hallstrom… - Journal of Chemical …, 2023 - ACS Publications
Thermodynamic stability assessment of nanocrystal systems requires precise free energy
calculations. This study highlights the importance of meticulous control over various factors …

Interplay between charge distribution and DNA in shaping HP1 paralog phase separation and localization

TM Phan, YC Kim, GT Debelouchina, J Mittal - Elife, 2024 - elifesciences.org
Abstract The heterochromatin protein 1 (HP1) family is a crucial component of
heterochromatin with diverse functions in gene regulation, cell cycle control, and cell …