[HTML][HTML] Application of next generation sequencing in laboratory medicine
The rapid development of next-generation sequencing (NGS) technology, including
advances in sequencing chemistry, sequencing technologies, bioinformatics, and data …
advances in sequencing chemistry, sequencing technologies, bioinformatics, and data …
The use of next generation sequencing for improving food safety: Translation into practice
B Jagadeesan, P Gerner-Smidt, MW Allard, S Leuillet… - Food …, 2019 - Elsevier
Abstract Next Generation Sequencing (NGS) combined with powerful bioinformatic
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
Whole-genome sequencing for detecting antimicrobial resistance in nontyphoidal Salmonella
PF McDermott, GH Tyson, C Kabera… - Antimicrobial agents …, 2016 - Am Soc Microbiol
Laboratory-based in vitro antimicrobial susceptibility testing is the foundation for guiding anti-
infective therapy and monitoring antimicrobial resistance trends. We used whole-genome …
infective therapy and monitoring antimicrobial resistance trends. We used whole-genome …
Smart traceability for food safety
Current food production faces a tremendous challenge due to the growing human
population. The global population is estimated to reach 9 billion by 2050 with 70% more …
population. The global population is estimated to reach 9 billion by 2050 with 70% more …
Implementation of nationwide real-time whole-genome sequencing to enhance listeriosis outbreak detection and investigation
BR Jackson, C Tarr, E Strain, KA Jackson… - Reviews of Infectious …, 2016 - academic.oup.com
Listeria monocytogenes (Lm) causes severe foodborne illness (listeriosis). Previous
molecular subtyping methods, such as pulsed-field gel electrophoresis (PFGE), were critical …
molecular subtyping methods, such as pulsed-field gel electrophoresis (PFGE), were critical …
Practical value of food pathogen traceability through building a whole-genome sequencing network and database
The FDA has created a United States-based open-source whole-genome sequencing
network of state, federal, international, and commercial partners. The GenomeTrakr network …
network of state, federal, international, and commercial partners. The GenomeTrakr network …
Interpreting whole-genome sequence analyses of foodborne bacteria for regulatory applications and outbreak investigations
AW Pightling, JB Pettengill, Y Luo, JD Baugher… - Frontiers in …, 2018 - frontiersin.org
Whole-genome sequence (WGS) analysis has revolutionized the food safety industry by
enabling high-resolution typing of foodborne bacteria. Higher resolving power allows …
enabling high-resolution typing of foodborne bacteria. Higher resolving power allows …
[HTML][HTML] Foodborne viruses: Detection, risk assessment, and control options in food processing
A Bosch, E Gkogka, FS Le Guyader… - International Journal of …, 2018 - Elsevier
In a recent report by risk assessment experts on the identification of food safety priorities
using the Delphi technique, foodborne viruses were recognized among the top rated food …
using the Delphi technique, foodborne viruses were recognized among the top rated food …
Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences
The open sharing of genomic data provides an incredibly rich resource for the study of
bacterial evolution and function and even anthropogenic activities such as the widespread …
bacterial evolution and function and even anthropogenic activities such as the widespread …
Use of whole-genome sequencing for food safety and public health in the United States
E Brown, U Dessai, S McGarry… - … pathogens and disease, 2019 - liebertpub.com
Whole-genome sequencing (WGS) is increasingly used by food regulatory and public health
agencies in the United States to facilitate the detection, investigation, and control of …
agencies in the United States to facilitate the detection, investigation, and control of …