Mass spectrometry‐based forest tree metabolomics

AM Rodrigues, C Miguel, I Chaves… - Mass spectrometry …, 2021 - Wiley Online Library
Research in forest tree species has advanced slowly when compared with other agricultural
crops and model organisms, mainly due to the long‐life cycles, large genome sizes, and …

Towards integration of population and comparative genomics in forest trees

PK Ingvarsson, TR Hvidsten, NR Street - New Phytologist, 2016 - Wiley Online Library
The past decade saw the initiation of an ongoing revolution in sequencing technologies that
is transforming all fields of biology. This has been driven by the advent and widespread …

pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar

L de Vries, HA MacKay, RA Smith, Y Mottiar… - Plant …, 2022 - academic.oup.com
Poplar (Populus) lignin is naturally acylated with p-hydroxybenzoate ester moieties.
However, the enzyme (s) involved in the biosynthesis of the monolignol–p …

Insights of biomass recalcitrance in natural Populus trichocarpa variants for biomass conversion

CG Yoo, Y Yang, Y Pu, X Meng, W Muchero, KL Yee… - Green …, 2017 - pubs.rsc.org
Populus has been investigated as a promising biomass feedstock for alternative fuels and
chemicals. Physicochemical characteristics and genomic information of biomass feedstocks …

Genomic and functional approaches reveal a case of adaptive introgression from Populus balsamifera (balsam poplar) in Ptrichocarpa (black cottonwood)

A Suarez‐Gonzalez, CA Hefer, C Christe… - Molecular …, 2016 - Wiley Online Library
Natural hybrid zones in forest trees provide systems to study the transfer of adaptive genetic
variation by introgression. Previous landscape genomic studies in Populus trichocarpa, a …

Genome‐wide association study reveals putative regulators of bioenergy traits in Populus deltoides

AM Fahrenkrog, LG Neves, MFR Resende Jr… - New …, 2017 - Wiley Online Library
Genome‐wide association studies (GWAS) have been used extensively to dissect the
genetic regulation of complex traits in plants. These studies have focused largely on the …

Compensatory Guaiacyl Lignin Biosynthesis at the Expense of Syringyl Lignin in 4CL1-Knockout Poplar

CJ Tsai, P Xu, LJ Xue, H Hu, B Nyamdari… - Plant …, 2020 - academic.oup.com
The lignin biosynthetic pathway is highly conserved in angiosperms, yet pathway
manipulations give rise to a variety of taxon-specific outcomes. Knockout of lignin …

Genome-wide identification and expression profile analysis of metal tolerance protein gene family in Eucalyptus grandis under metal stresses

Z Shirazi, F Khakdan, F Rafiei, MY Balalami… - BMC Plant …, 2023 - Springer
Metal tolerance proteins (MTPs) as Me2+/H+ (K+) antiporters participate in the transport of
divalent cations, leading to heavy metal stress resistance and mineral utilization in plants. In …

Hardwood tree genomics: unlocking woody plant biology

GA Tuskan, AT Groover, J Schmutz… - Frontiers in plant …, 2018 - frontiersin.org
Woody perennial angiosperms (ie, hardwood trees) are polyphyletic in origin and occur in
most angiosperm orders. Despite their independent origins, hardwoods have shared …

Poplar carbohydrate‐active enzymes: whole‐genome annotation and functional analyses based on RNA expression data

V Kumar, M Hainaut, N Delhomme… - The Plant …, 2019 - Wiley Online Library
Carbohydrate‐active enzymes (CAZ ymes) catalyze the formation and modification of
glycoproteins, glycolipids, starch, secondary metabolites and cell wall biopolymers. They are …