Taming transposable elements in vertebrates: from epigenetic silencing to domestication

MV Almeida, G Vernaz, ALK Putman, EA Miska - Trends in Genetics, 2022 - cell.com
Transposable element (TE)-derived sequences are ubiquitous in most eukaryotic genomes
known to date. Because their expression and mobility can lead to genomic instability …

[HTML][HTML] Understanding'non-genetic'inheritance: insights from molecular-evolutionary crosstalk

I Adrian-Kalchhauser, SE Sultan, LNS Shama… - Trends in ecology & …, 2020 - cell.com
Understanding the evolutionary and ecological roles of'non-genetic'inheritance (NGI) is
daunting due to the complexity and diversity of epigenetic mechanisms. We draw on insights …

[HTML][HTML] Long non-coding RNA CDKN2B-AS1 reduces inflammatory response and promotes cholesterol efflux in atherosclerosis by inhibiting ADAM10 expression

H Li, S Han, Q Sun, Y Yao, S Li, C Yuan… - Aging (Albany …, 2019 - ncbi.nlm.nih.gov
Abstract Introduction: Long non-coding RNAs (lncRNAs) play key roles in the development
of atherosclerosis through the inflammatory pathway. This study aimed to investigate the role …

Evolutionary history of DNA methylation related genes in chordates: new insights from multiple whole genome duplications

J Liu, H Hu, S Panserat, L Marandel - Scientific reports, 2020 - nature.com
DNA methylation is an important epigenetic mechanism involved in many biological
processes, ie gametogenesis and embryonic development. However, increased copy …

Annelid methylomes reveal ancestral developmental and aging-associated epigenetic erosion across Bilateria

K Guynes, LA Sarre, AM Carrillo-Baltodano, BE Davies… - Genome Biology, 2024 - Springer
Background DNA methylation in the form of 5-methylcytosine (5mC) is the most abundant
base modification in animals. However, 5mC levels vary widely across taxa. While …

DNA methylation in the vertebrate germline: balancing memory and erasure

O Ortega-Recalde, TA Hore - Essays in biochemistry, 2019 - portlandpress.com
Cytosine methylation is a DNA modification that is critical for vertebrate development and
provides a plastic yet stable information module in addition to the DNA code. DNA …

Dynamic evolution of de novo DNA methyltransferases in rodent and primate genomes

A Molaro, HS Malik, D Bourc'his - Molecular biology and …, 2020 - academic.oup.com
Transcriptional silencing of retrotransposons via DNA methylation is paramount for
mammalian fertility and reproductive fitness. During germ cell development, most …

[HTML][HTML] Adaptive selection in the evolution of programmed cell death-1 and its ligands in vertebrates

HI Ahmad, J Zhou, MJ Ahmad, G Afzal, H Jiang… - Aging (Albany …, 2020 - ncbi.nlm.nih.gov
Abstract Programmed cell death-1 (PD-1) and its ligands, particularly PD-L1 and PD-L2, are
the most important proteins responsible for signaling T-cell inhibition and arbitrating immune …

Myxosporea (Myxozoa, Cnidaria) lack DNA cytosine methylation

R Kyger, A Luzuriaga-Neira, T Layman… - Molecular Biology …, 2021 - academic.oup.com
DNA cytosine methylation is central to many biological processes, including regulation of
gene expression, cellular differentiation, and development. This DNA modification is …

A long intergenic non-coding RNA regulates nuclear localization of DNA methyl transferase-1

R Jones, S Wijesinghe, C Wilson, J Halsall, T Liloglou… - Iscience, 2021 - cell.com
DNA methyl transferase-1 or DNMT1 maintains DNA methylation in the genome and is
important for regulating gene expression in cells. Aberrant changes in DNMT1 activity and …