Artificial intelligence reveals features associated with breast cancer neoadjuvant chemotherapy responses from multi-stain histopathologic images

Z Huang, W Shao, Z Han, AM Alkashash… - NPJ Precision …, 2023 - nature.com
Advances in computational algorithms and tools have made the prediction of cancer patient
outcomes using computational pathology feasible. However, predicting clinical outcomes …

[HTML][HTML] Publicly available datasets of breast histopathology H&E whole-slide images: A scoping review

M Tafavvoghi, LA Bongo, N Shvetsov… - Journal of Pathology …, 2024 - Elsevier
Advancements in digital pathology and computing resources have made a significant impact
in the field of computational pathology for breast cancer diagnosis and treatment. However …

Predicting molecular phenotypes from histopathology images: a transcriptome-wide expression–morphology analysis in breast cancer

Y Wang, K Kartasalo, P Weitz, B Acs, M Valkonen… - Cancer research, 2021 - AACR
Molecular profiling is central in cancer precision medicine but remains costly and is based
on tumor average profiles. Morphologic patterns observable in histopathology sections from …

Unsupervised histological image registration using structural feature guided convolutional neural network

L Ge, X Wei, Y Hao, J Luo, Y Xu - IEEE Transactions on …, 2022 - ieeexplore.ieee.org
Registration of multiple stained images is a fundamental task in histological image analysis.
In supervised methods, obtaining ground-truth data with known correspondences is …

Elastic transformation of histological slices allows precise co-registration with microCT data sets for a refined virtual histology approach

J Albers, A Svetlove, J Alves, A Kraupner, F di Lillo… - Scientific Reports, 2021 - nature.com
Although X-ray based 3D virtual histology is an emerging tool for the analysis of biological
tissue, it falls short in terms of specificity when compared to conventional histology. Thus, the …

[HTML][HTML] RegWSI: Whole slide image registration using combined deep feature-and intensity-based methods: Winner of the ACROBAT 2023 challenge

M Wodzinski, N Marini, M Atzori, H Müller - Computer Methods and …, 2024 - Elsevier
Background and objective The automatic registration of differently stained whole slide
images (WSIs) is crucial for improving diagnosis and prognosis by fusing complementary …

End-to-end affine registration framework for histopathological images with weak annotations

Y Lin, Z Liang, Y He, W Huang, T Guan - Computer Methods and Programs …, 2023 - Elsevier
Abstract Background and Objective Histopathological image registration is an essential
component in digital pathology and biomedical image analysis. Deep-learning-based …

[HTML][HTML] Deep learning based registration of serial whole-slide histopathology images in different stains

M Roy, F Wang, G Teodoro, S Bhattarai… - Journal of Pathology …, 2023 - Elsevier
For routine pathology diagnosis and imaging-based biomedical research, Whole-slide
image (WSI) analyses have been largely limited to a 2D tissue image space. For a more …

Deep feature based cross-slide registration

R Awan, SEA Raza, J Lotz, N Weiss… - … Medical Imaging and …, 2023 - Elsevier
Registration of multiple sections in a tissue block is an important pre-requisite task before
any cross-slide image analysis. Non-rigid registration methods are capable of finding …

A deep learning method for automatic evaluation of diagnostic information from multi-stained histopathological images

J Ji, T Wan, D Chen, H Wang, M Zheng, Z Qin - Knowledge-Based Systems, 2022 - Elsevier
Manual screening of large-scale histopathological images is an extremely time-consuming,
laborious and subjective procedure. Accurate evaluation of diagnostic information from multi …