Design of functional intrinsically disordered proteins

A Garg, NS González-Foutel, MB Gielnik… - Protein Engineering …, 2024 - academic.oup.com
Many proteins do not fold into a fixed three-dimensional structure, but rather function in a
highly disordered state. These intrinsically disordered proteins pose a unique challenge to …

DNN-Dom: predicting protein domain boundary from sequence alone by deep neural network

Q Shi, W Chen, S Huang, F Jin, Y Dong, Y Wang… - …, 2019 - academic.oup.com
Motivation Accurate delineation of protein domain boundary plays an important role for
protein engineering and structure prediction. Although machine-learning methods are …

[HTML][HTML] Structural properties of the linkers connecting the N-and C-terminal domains in the MocR bacterial transcriptional regulators

T Milano, S Angelaccio, A Tramonti, ML Di Salvo… - Biochimie open, 2016 - Elsevier
Peptide inter-domain linkers are peptide segments covalently linking two adjacent domains
within a protein. Linkers play a variety of structural and functional roles in naturally occurring …

Brushless DC motor controller optimization using simulated annealing

M Shatnawi, E Bayoumi - 2019 International Conference on …, 2019 - ieeexplore.ieee.org
The proportional-integral (PI) and proportional-integral-derivative (PID) controllers are
widely used in Brushless Direct Current (BLDC) motors. To accommodate the high …

Integrating group support systems, joint application development, and computer-aided software engineering for requirements specification

YI Liou, M Chen - [1993] Proceedings of the Twenty-sixth …, 1993 - ieeexplore.ieee.org
The possibility of integrating group support systems (GSSs), joint application development
(JAD), and computer-aided software engineering (CASE) tools to support the requirements …

[PDF][PDF] Simulated Annealing Optimization of PMBLDC Motor Speed and Current Controllers

M Shatnawi, E Bayoumi - WSEAS Transactions on Power Systems, 2020 - wseas.com
Brushless Direct-Current (BLDC) motors have several advantages including high efficiency
and high speed ranges and accordingly are commonly used in a broad range of industrial …

Novel domain identification approach for protein-protein interaction prediction

M Shatnawi, NM Zaki - 2015 IEEE Conference on …, 2015 - ieeexplore.ieee.org
Protein-protein interaction (PPI) plays a crucial role in cellular biological processes and
functions. The identification of protein interactions can lead to a better understanding of …

Refinement and improvement of template based protein modelling algorithms

A Runthala - 2015 - dspace.bits-pilani.ac.in
Protein structure prediction algorithms are studied to construct accurate models of the
newlineprotein sequences for bridging the ever-increasing gap between the available count …

CLASSIFICATION OF SIGNALING PROTEINS USING COMPUTER-BASED METHODS

ÇK ÇAVAŞ, Ç KÜÇÜK - Euroasia Journal of Mathematics …, 2020 - euroasiajournal.org
Özet Cells send signals between them to start or end biological activities. These signals can
bemolecules like proteins, hormones. Receptors outside and inside of the cell capture …

Novel Tree-Based Proximity Search with SMOTE and Compositional Indexing Techniques for Protein Domain Identification

M Shatnawi - 2016 27th International Workshop on Database …, 2016 - ieeexplore.ieee.org
Proteins are generally long chains and consist of multiple domains. Domains are distinct
structural units of a protein that can evolve and function independently. The accurate and …