Water dynamics in the hydration shells of biomolecules

D Laage, T Elsaesser, JT Hynes - Chemical Reviews, 2017 - ACS Publications
The structure and function of biomolecules are strongly influenced by their hydration shells.
Structural fluctuations and molecular excitations of hydrating water molecules cover a broad …

Water determines the structure and dynamics of proteins

MC Bellissent-Funel, A Hassanali, M Havenith… - Chemical …, 2016 - ACS Publications
Water is an essential participant in the stability, structure, dynamics, and function of proteins
and other biomolecules. Thermodynamically, changes in the aqueous environment affect …

Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs)

FX Theillet, A Binolfi, T Frembgen-Kesner… - Chemical …, 2014 - ACS Publications
It has long been axiomatic that a protein's structure determines its function. Intrinsically
disordered proteins (IDPs) and disordered protein regions (IDRs) defy this structure …

Watching proteins wiggle: mapping structures with two-dimensional infrared spectroscopy

A Ghosh, JS Ostrander, MT Zanni - Chemical reviews, 2017 - ACS Publications
Proteins exhibit structural fluctuations over decades of time scales. From the picosecond
side chain motions to aggregates that form over the course of minutes, characterizing protein …

Experimental implementations of two-dimensional Fourier transform electronic spectroscopy

FD Fuller, JP Ogilvie - Annual review of physical chemistry, 2015 - annualreviews.org
Two-dimensional electronic spectroscopy (2DES) reveals connections between an optical
excitation at a given frequency and the signals it creates over a wide range of frequencies …

Beyond the excluded volume effects: mechanistic complexity of the crowded milieu

IM Kuznetsova, BY Zaslavsky, L Breydo, KK Turoverov… - Molecules, 2015 - mdpi.com
Macromolecular crowding is known to affect protein folding, binding of small molecules,
interaction with nucleic acids, enzymatic activity, protein-protein interactions, and protein …

Crowding in cellular environments at an atomistic level from computer simulations

M Feig, I Yu, P Wang, G Nawrocki… - The Journal of Physical …, 2017 - ACS Publications
The effects of crowding in biological environments on biomolecular structure, dynamics, and
function remain not well understood. Computer simulations of atomistic models of …

Biomolecular condensates modulate membrane lipid packing and hydration

A Mangiarotti, M Siri, NW Tam, Z Zhao… - Nature …, 2023 - nature.com
Membrane wetting by biomolecular condensates recently emerged as a key phenomenon in
cell biology, playing an important role in a diverse range of processes across different …

Molecular crowding: the history and development of a scientific paradigm

C Alfano, Y Fichou, K Huber, M Weiss, E Spruijt… - Chemical …, 2024 - ACS Publications
It is now generally accepted that macromolecules do not act in isolation but “live” in a
crowded environment, that is, an environment populated by numerous different molecules …

Site-specific infrared probes of proteins

J Ma, IM Pazos, W Zhang, RM Culik… - Annual review of …, 2015 - annualreviews.org
Infrared spectroscopy has played an instrumental role in the study of a wide variety of
biological questions. However, in many cases, it is impossible or difficult to rely on the …