Towards a biologically annotated brain connectome

V Bazinet, JY Hansen, B Misic - Nature reviews neuroscience, 2023 - nature.com
The brain is a network of interleaved neural circuits. In modern connectomics, brain
connectivity is typically encoded as a network of nodes and edges, abstracting away the rich …

Intrinsic activity development unfolds along a sensorimotor–association cortical axis in youth

VJ Sydnor, B Larsen, J Seidlitz, A Adebimpe… - Nature …, 2023 - nature.com
Animal studies of neurodevelopment have shown that recordings of intrinsic cortical activity
evolve from synchronized and high amplitude to sparse and low amplitude as plasticity …

brainlife. io: a decentralized and open-source cloud platform to support neuroscience research

S Hayashi, BA Caron, AS Heinsfeld, S Vinci-Booher… - Nature …, 2024 - nature.com
Neuroscience is advancing standardization and tool development to support rigor and
transparency. Consequently, data pipeline complexity has increased, hindering FAIR …

Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging

AI Renton, TT Dao, T Johnstone, O Civier… - Nature …, 2024 - nature.com
Neuroimaging research requires purpose-built analysis software, which is challenging to
install and may produce different results across computing environments. The community …

ISMRM open science initiative for perfusion imaging (OSIPI): ASL pipeline inventory

H Fan, HJMM Mutsaerts, U Anazodo… - Magnetic resonance …, 2024 - Wiley Online Library
Purpose To create an inventory of image processing pipelines of arterial spin labeling (ASL)
and list their main features, and to evaluate the capability, flexibility, and ease of use of …

[PDF][PDF] Regression of periventricular anastomosis after indirect revascularization in pediatric patients with moyamoya disease

EY Zheng, S Hara, M Inaji, Y Tanaka, T Nariai… - Journal of …, 2023 - thejns.org
OBJECTIVE The aim of this study was to evaluate whether indirect revascularization in
pediatric patients with moyamoya disease leads to periventricular anastomosis (PVA) …

Arterial spin labeling (ASL) in neuroradiological diagnostics–methodological overview and use cases

N Sollmann, G Hoffmann, S Schramm… - RöFo-Fortschritte auf …, 2023 - thieme-connect.com
Background Arterial spin labeling (ASL) is a magnetic resonance imaging (MRI)-based
technique using labeled blood-water of the brain-feeding arteries as an endogenous tracer …

[HTML][HTML] XCP-D: A Robust Pipeline for the post-processing of fMRI data

K Mehta, T Salo, TJ Madison, A Adebimpe… - Imaging …, 2024 - direct.mit.edu
Functional neuroimaging is an essential tool for neuroscience research. Pre-processing
pipelines produce standardized, minimally pre-processed data to support a range of …

[HTML][HTML] Neuroimaging and biosample collection in the Toronto Adolescent and Youth Cohort Study: Rationale, methods, and early data

EW Dickie, SH Ameis, I Boileau, AO Diaconescu… - Biological Psychiatry …, 2024 - Elsevier
Abstract Background The Toronto Adolescent and Youth (TAY) Cohort Study will
characterize the neurobiological trajectories of psychosis spectrum symptoms, functioning …

Secondary thalamic dysfunction underlies abnormal large-scale neural dynamics in chronic stroke

PR Johnston, JD Griffiths, L Rokos, AR McIntosh… - Proceedings of the …, 2024 - pnas.org
Stroke causes pronounced and widespread slowing of neural activity. Despite decades of
work exploring these abnormal neural dynamics and their associated functional …