DNA damage and repair in plants–from models to crops

V Manova, D Gruszka - Frontiers in plant science, 2015 - frontiersin.org
The genomic integrity of every organism is constantly challenged by endogenous and
exogenous DNA-damaging factors. Mutagenic agents cause reduced stability of plant …

Genome evolution in polyploids

JF Wendel - Plant molecular evolution, 2000 - Springer
Polyploidy is a prominent process in plants and has been significant in the evolutionary
history of vertebrates and other eukaryotes. In plants, interdisciplinary approaches …

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence

R Kalendar, J Tanskanen, S Immonen… - Proceedings of the …, 2000 - National Acad Sciences
The replicative spread of retrotransposons in the genome creates new insertional
polymorphisms, increasing retrotransposon numbers and potentially both their share of the …

Elevated UV-B radiation reduces genome stability in plants

G Ries, W Heller, H Puchta, H Sandermann… - Nature, 2000 - nature.com
Long-term depletion of the stratospheric ozone layer contributes to an increase in terrestrial
solar ultraviolet-B radiation,,. This has deleterious effects on living organisms, such as DNA …

Intraspecific violation of genetic colinearity and its implications in maize

H Fu, HK Dooner - Proceedings of the National Academy of …, 2002 - National Acad Sciences
Although allelic sequences can vary extensively, it is generally assumed that each gene in
one individual will have an allelic counterpart in another individual of the same species. We …

[HTML][HTML] Capture of genomic and T‐DNA sequences during double‐strand break repair in somatic plant cells

S Salomon, H Puchta - The EMBO journal, 1998 - embopress.org
To analyze genomic changes resulting from double‐strand break (DSB) repair, transgenic
tobacco plants were obtained that carried in their genome a restriction site of the rare cutting …

Efficient gene targeting by homologous recombination in rice

R Terada, H Urawa, Y Inagaki, K Tsugane… - Nature biotechnology, 2002 - nature.com
Modification of genes through homologous recombination, termed gene targeting, is the
most direct method to characterize gene function. In higher plants, however, the method is …

[HTML][HTML] DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic virus

H Jeske, M Lütgemeier, W Preiß - The EMBO journal, 2001 - embopress.org
Geminiviruses have spread worldwide and have become increasingly important in crop
plants during recent decades. Recombination among geminiviruses was one major source …

Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum

CM Vicient, A Suoniemi, K Anamthawat-Jónsson… - The Plant …, 1999 - academic.oup.com
The replicative retrotransposon life cycle offers the potential for explosive increases in copy
number and consequent inflation of genome size. The BARE-1 retrotransposon family of …

A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion

K Shirasu, AH Schulman, T Lahaye… - Genome …, 2000 - genome.cshlp.org
Organisms with large genomes contain vast amounts of repetitive DNA sequences, much of
which is composed of retrotransposons. Amplification of retrotransposons has been …