Dissecting complex traits using the Drosophila synthetic population resource

AD Long, SJ Macdonald, EG King - Trends in Genetics, 2014 - cell.com
For most complex traits we have a poor understanding of the positions, phenotypic effects,
and population frequencies of the underlying genetic variants contributing to their variation …

Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits

M Chakraborty, JJ Emerson, SJ Macdonald… - Nature …, 2019 - nature.com
It has been hypothesized that individually-rare hidden structural variants (SVs) could
account for a significant fraction of variation in complex traits. Here we identified more than …

Hidden genetic variation shapes the structure of functional elements in Drosophila

M Chakraborty, NW VanKuren, R Zhao, X Zhang… - Nature …, 2018 - nature.com
Mutations that add, subtract, rearrange, or otherwise refashion genome structure often affect
phenotypes, although the fragmented nature of most contemporary assemblies obscures …

How to get the most bang for your buck: the evolution and physiology of nutrition-dependent resource allocation strategies

E Ng'oma, AM Perinchery… - Proceedings of the …, 2017 - royalsocietypublishing.org
All organisms use resources to grow, survive and reproduce. The supply of these resources
varies widely across landscapes and time, imposing ultimate constraints on the maximal trait …

The UDP-Glycosyltransferase Family in Drosophila melanogaster: Nomenclature Update, Gene Expression and Phylogenetic Analysis

SJ Ahn, SJ Marygold - Frontiers in physiology, 2021 - frontiersin.org
UDP-glycosyltransferases (UGTs) are important conjugation enzymes found in all kingdoms
of life, catalyzing a sugar conjugation with small lipophilic compounds and playing a crucial …

Polygenicity and Epistasis Underlie Fitness-Proximal Traits in the Caenorhabditis elegans Multiparental Experimental Evolution (CeMEE) Panel

LM Noble, I Chelo, T Guzella, B Afonso, DD Riccardi… - Genetics, 2017 - academic.oup.com
Using a new experimentally evolved multiparent mapping resource for C. elegans, Noble et
al. have outlined the genetic architecture of worm fertility.. Understanding the genetic basis …

UDP-glucosyltransferases potentially contribute to imidacloprid resistance in Aphis gossypii glover based on transcriptomic and proteomic analyses

X Chen, J Xia, Q Shang, D Song, X Gao - Pesticide biochemistry and …, 2019 - Elsevier
The cotton aphid, Aphis gossypii Glover, is a destructive global crop pest. Control of A.
gossypii has relied heavily on the application of chemical insecticides. The cotton aphid has …

The plastic response of Manduca sexta to host and non-host plants

C Koenig, A Bretschneider, DG Heckel… - Insect biochemistry and …, 2015 - Elsevier
Specialist insect herbivores have evolved efficient ways to adapt to the major defenses of
their host plants. Although Manduca sexta, specialized on Solanaceous plants, has become …

Power analysis of artificial selection experiments using efficient whole genome simulation of quantitative traits

D Kessner, J Novembre - Genetics, 2015 - academic.oup.com
Evolve and resequence studies combine artificial selection experiments with massively
parallel sequencing technology to study the genetic basis for complex traits. In these …

Shared genomic regions underlie natural variation in diverse toxin responses

KS Evans, SC Brady, JS Bloom, RE Tanny, DE Cook… - Genetics, 2018 - academic.oup.com
Phenotypic complexity is caused by the contributions of environmental factors and multiple
genetic loci, interacting or acting independently. Studies of yeast and Arabidopsis often find …