Mobile genetic element-based gene editing and genome engineering: Recent advances and applications

J Hwang, DY Ye, GY Jung, S Jang - Biotechnology Advances, 2024 - Elsevier
Genome engineering has revolutionized several scientific fields, ranging from biochemistry
and fundamental research to therapeutic uses and crop development. Diverse engineering …

Mechanistic insights into transposon cleavage and integration by TnsB of ShCAST system

T Zeng, J Yin, Z Liu, Z Li, Y Zhang, Y Lv, ML Lu, M Luo… - Cell Reports, 2023 - cell.com
The type VK CRISPR-associated transposons (CASTs) allow RNA-guided DNA integration
and have great potential as a programmable site-specific gene insertion tool. Although all …

Digging into the lesser-known aspects of CRISPR biology

NM Guzmán, B Esquerra-Ruvira, FJM Mojica - International Microbiology, 2021 - Springer
A long time has passed since regularly interspaced DNA repeats were discovered in
prokaryotes. Today, those enigmatic repetitive elements termed clustered regularly …

A Toolkit for Effective and Successive Genome Engineering of Escherichia coli

B Arab, A Westbrook, M Moo-Young, CHP Chou - Fermentation, 2022 - mdpi.com
The bacterium Escherichia coli has been well-justified as an effective workhorse for
industrial applications. In this study, we developed a toolkit for flexible genome engineering …

Mechanistic Insight Into the Conformational Changes of Cas8 Upon Binding to Different PAM Sequences in the Transposon‐Encoded Type I‐F CRISPR‐Cas System

A Alalmaie, R Khashan - Proteins: Structure, Function, and …, 2024 - Wiley Online Library
The INTEGRATE system is a gene‐editing approach that offers advantages over the widely
used CRISPR‐Cas9 system. It does not introduce double strand breaks in the target DNA …

<? span Start cssStyle=" color:# 640026"?> Molecular Mechanisms of Type I CRISPR‐Cas Systems

J van der Oost - Crispr: Biology and Applications, 2022 - Wiley Online Library
CRISPR‐Cas class 1 includes types I, III, and IV. All class 1 systems have typical
multisubunit complexes, often with a Cas nuclease, either stand‐alone (Cas3 in type I) or …

[图书][B] Discovery of RNA-guided DNA integration by CRISPR-associated transposases

SE Klompe - 2023 - search.proquest.com
Bacteria live under constant assault by bacteriophages and have evolved a diverse array of
defense strategies. CRISPR-Cas systems are prokaryotic adaptive immune systems that rely …

The Impact of Mismatches Within the RNA: DNA Hybrid in the Transposon-Encoded Type IF CRISPR-Cas System

A Alalmaie, R Khashan - bioRxiv, 2024 - biorxiv.org
Recent research has revealed a collaboration between type IF CRISPR systems and Tn7
transposons in certain bacteria, leading to the discovery of a new gene-editing tool called …

[PDF][PDF] A Toolkit for Effective and Successive Genome Engineering of Escherichia coli. Fermentation 2023, 9, 14

B Arab, A Westbrook, M Moo-Young, CHP Chou - 2022 - academia.edu
The bacterium Escherichia coli has been well-justified as an effective workhorse for
industrial applications. In this study, we developed a toolkit for flexible genome engineering …