Three-dimensional genome organization in immune cell fate and function

S Cuartero, G Stik, R Stadhouders - Nature Reviews Immunology, 2023 - nature.com
Immune cell development and activation demand the precise and coordinated control of
transcriptional programmes. Three-dimensional (3D) organization of the genome has …

ARID1A loss in cancer: towards a mechanistic understanding

R Mathur - Pharmacology & therapeutics, 2018 - Elsevier
Genes encoding subunits of SWI/SNF chromatin remodeling complexes are collectively
mutated in 20% of all human cancers. ARID1A is the SWI/SNF subunit gene that is most …

Oncogenic gene expression and epigenetic remodeling of cis-regulatory elements in ASXL1-mutant chronic myelomonocytic leukemia

M Binder, RM Carr, TL Lasho, CM Finke… - Nature …, 2022 - nature.com
Myeloid neoplasms are clonal hematopoietic stem cell disorders driven by the sequential
acquisition of recurrent genetic lesions. Truncating mutations in the chromatin remodeler …

Oncogenic Enhancers in Leukemia

R Mulet-Lazaro, R Delwel - Blood Cancer Discovery, 2024 - aacrjournals.org
Although the study of leukemogenesis has traditionally focused on protein-coding genes,
the role of enhancer dysregulation is becoming increasingly recognized. The advent of high …

Noncanonical EZH2 drives retinoic acid resistance of variant acute promyelocytic leukemias

M Poplineau, N Platet, A Mazuel… - Blood, The Journal …, 2022 - ashpublications.org
Cancer cell heterogeneity is a major driver of therapy resistance. To characterize resistant
cells and their vulnerabilities, we studied the PLZF-RARA variant of acute promyelocytic …

Oncogenic transcription factors instruct promoter-enhancer hubs in individual triple negative breast cancer cells

J Zhao, Y Zhou, I Tzelepis, NG Burget, J Shi… - Science …, 2024 - science.org
Sequencing-based mapping of ensemble pairwise interactions among regulatory elements
support the existence of topological assemblies known as promoter-enhancer hubs or …

Mechanistic basis and efficacy of targeting the β-catenin–TCF7L2–JMJD6–c-Myc axis to overcome resistance to BET inhibitors

DT Saenz, W Fiskus, CP Mill, D Perera… - Blood, The Journal …, 2020 - ashpublications.org
The promising activity of BET protein inhibitors (BETi's) is compromised by adaptive or
innate resistance in acute myeloid leukemia (AML). Here, modeling of BETi …

Enhancer-gene rewiring in the pathogenesis of Quebec platelet disorder

M Liang, A Soomro, S Tasneem… - Blood, The Journal …, 2020 - ashpublications.org
Quebec platelet disorder (QPD) is an autosomal dominant bleeding disorder with a unique,
platelet-dependent, gain-of-function defect in fibrinolysis, without systemic fibrinolysis. The …

Epigenomic mapping reveals distinct B cell acute lymphoblastic leukemia chromatin architectures and regulators

KR Barnett, RJ Mobley, JD Diedrich, BP Bergeron… - Cell Genomics, 2023 - cell.com
B cell lineage acute lymphoblastic leukemia (B-ALL) is composed of diverse molecular
subtypes, and while transcriptional and DNA methylation profiling has been extensively …

Enhancer engagement sustains oncogenic transformation and progression of B-cell precursor acute lymphoblastic leukemia

G Corleone, C Sorino, M Caforio… - Journal of Experimental …, 2024 - Springer
Background Enhancer reprogramming plays a significant role in the heterogeneity of cancer.
However, we have limited knowledge about the impact of chromatin remodeling in B-Cell …