We present schema redescription as a methodology to characterize canalization in automata networks used to model biochemical regulation and signalling. In our formulation …
S An, SY Jang, SM Park, CK Lee, HM Kim… - …, 2023 - academic.oup.com
Motivation Cellular behavior is determined by complex non-linear interactions between numerous intracellular molecules that are often represented by Boolean network models. To …
A Ma'ayan, K Gardiner, R Iyengar - NeuroRx, 2006 - Springer
Down syndrome (DS) is caused by trisomy of chromosome 21. All individuals with DS exhibit some level of cognitive dysfunction. It is generally accepted that these abnormalities are a …
Canalization of genetic regulatory networks has been argued to be favoured by evolutionary processes due to the stability that it can confer to phenotype expression. We explore …
D Murrugarra, R Laubenbacher - Journal of theoretical biology, 2011 - Elsevier
Understanding design principles of molecular interaction networks is an important goal of molecular systems biology. Some insights have been gained into features of their network …
Colorectal tumors originate and develop within intestinal crypts. Even though some of the essential phenomena that characterize crypt structure and dynamics have been effectively …
R Heckel, S Schober, M Bossert - EURASIP Journal on Bioinformatics and …, 2013 - Springer
Consider a large Boolean network with a feed forward structure. Given a probability distribution on the inputs, can one find, possibly small, collections of input nodes that …
Motivation: Modern experimental techniques for time course measurement of gene expression enable the identification of dynamical models of genetic regulatory networks. In …