The unexhausted potential of E. coli

ZD Blount - elife, 2015 - elifesciences.org
E. coli's hardiness, versatility, broad palate and ease of handling have made it the most
intensively studied and best understood organism on the planet. However, research on E …

Importance of soil amendments: survival of bacterial pathogens in manure and compost used as organic fertilizers

M Sharma, R Reynnells - Preharvest food safety, 2018 - Wiley Online Library
Biological soil amendments (BSAs), including manure, compost, and compost teas (CTs),
play an important role in conventional and organic agriculture. The use of these …

The effects of soil depth on the structure of microbial communities in agricultural soils in Iowa (United States)

J Hao, YN Chai, LD Lopes, RA Ordóñez… - Applied and …, 2021 - Am Soc Microbiol
This study investigated the differences in microbial community abundance, composition, and
diversity throughout the depth profiles in soils collected from corn and soybean fields in Iowa …

Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli

X Didelot, G Méric, D Falush, AE Darling - BMC genomics, 2012 - Springer
Background Escherichia coli is an important species of bacteria that can live as a harmless
inhabitant of the guts of many animals, as a pathogen causing life-threatening conditions or …

Tryptophan-like fluorescence as a measure of microbial contamination risk in groundwater

S Nowicki, DJ Lapworth, JST Ward, P Thomson… - Science of the Total …, 2019 - Elsevier
Microbial water quality is frequently assessed with a risk indicator approach that relies on
Escherichia coli. Relying exclusively on E. coli is limiting, particularly in low-resource …

Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds

T Unno, J Jang, D Han, JH Kim… - … science & technology, 2010 - ACS Publications
While many current microbial source tracking (MST) methods rely on the use of specific
molecular marker genes to identify sources of fecal contamination, these methods often fail …

A framework for monitoring the safety of water services: from measurements to security

KJ Charles, S Nowicki, JK Bartram - NPJ Clean Water, 2020 - nature.com
The sustainable developments goals (SDGs) introduced monitoring of drinking water quality
to the international development agenda. At present, Escherichia coli are the primary …

Persistence of fecal indicators and microbial source tracking markers in water flushed from riverbank soils

JS Calderon, ME Verbyla, M Gil, F Pinongcos… - Water, Air, & Soil …, 2022 - Springer
Sewer overflows and exfiltration can potentially contaminate water bodies with pathogens
from wastewater. Microbial source tracking (MST) methods such as the detection of the …

Houseflies (Musca domestica) as vectors for extended-spectrum β-lactamase-producing Escherichia coli on Spanish broiler farms

M Solà-Ginés, JJ González-López… - Applied and …, 2015 - Am Soc Microbiol
Flies may act as potential vectors for the spread of resistant bacteria to different
environments. This study was intended to evaluate the presence of Escherichia coli strains …

Survival of Escherichia coli in Manure-Amended Soils Is Affected by Spatiotemporal, Agricultural, and Weather Factors in the Mid-Atlantic United States

M Sharma, PD Millner, F Hashem… - Applied and …, 2019 - Am Soc Microbiol
Untreated biological soil amendments of animal origin (BSAAO), such as manure, are
commonly used to fertilize soils for growing fruit and vegetable crops and can contain enteric …