Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv
Background The automation of data analysis in the form of scientific workflows has become
a widely adopted practice in many fields of research. Computationally driven data-intensive …
a widely adopted practice in many fields of research. Computationally driven data-intensive …
Packaging research artefacts with RO-Crate
An increasing number of researchers support reproducibility by including pointers to and
descriptions of datasets, software and methods in their publications. However, scientific …
descriptions of datasets, software and methods in their publications. However, scientific …
The human plasma proteome draft of 2017: building on the human plasma PeptideAtlas from mass spectrometry and complementary assays
Human blood plasma provides a highly accessible window to the proteome of any individual
in health and disease. Since its inception in 2002, the Human Proteome Organization's …
in health and disease. Since its inception in 2002, the Human Proteome Organization's …
FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research
BD Samuels, R Aho, JF Brinkley, A Bugacov… - …, 2020 - journals.biologists.com
ABSTRACT The FaceBase Consortium was established by the National Institute of Dental
and Craniofacial Research in 2009 as a 'big data'resource for the craniofacial research …
and Craniofacial Research in 2009 as a 'big data'resource for the craniofacial research …
The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain
Scalable technologies to sequence the transcriptomes and epigenomes of single cells are
transforming our understanding of cell types and cell states. The Brain Research through …
transforming our understanding of cell types and cell states. The Brain Research through …
FAIR computational workflows
Computational workflows describe the complex multi-step methods that are used for data
collection, data preparation, analytics, predictive modelling, and simulation that lead to new …
collection, data preparation, analytics, predictive modelling, and simulation that lead to new …
Recording provenance of workflow runs with RO-Crate
Recording the provenance of scientific computation results is key to the support of
traceability, reproducibility and quality assessment of data products. Several data models …
traceability, reproducibility and quality assessment of data products. Several data models …
FAIR principles for AI models with a practical application for accelerated high energy diffraction microscopy
A concise and measurable set of FAIR (Findable, Accessible, Interoperable and Reusable)
principles for scientific data is transforming the state-of-practice for data management and …
principles for scientific data is transforming the state-of-practice for data management and …
[HTML][HTML] Conceptualization and scalable execution of big data workflows using domain-specific languages and software containers
Big Data processing, especially with the increasing proliferation of Internet of Things (IoT)
technologies and convergence of IoT, edge and cloud computing technologies, involves …
technologies and convergence of IoT, edge and cloud computing technologies, involves …
[HTML][HTML] Sharing begins at home: how continuous and ubiquitous FAIRness can enhance research productivity and data reuse
The broad sharing of research data is widely viewed as critical for the speed, quality,
accessibility, and integrity of science. Despite increasing efforts to encourage data sharing …
accessibility, and integrity of science. Despite increasing efforts to encourage data sharing …