Foxtail millet: a model crop for genetic and genomic studies in bioenergy grasses

C Lata, S Gupta, M Prasad - Critical reviews in biotechnology, 2013 - Taylor & Francis
Foxtail millet is one of the oldest domesticated diploid C4 Panicoid crops having a
comparatively small genome size of approximately 515 Mb, short life cycle, and inbreeding …

The molecular ecologist's guide to expressed sequence tags

AMY Bouck, T Vision - Molecular ecology, 2007 - Wiley Online Library
Genomics and bioinformatics have great potential to help address numerous topics in
ecology and evolution. Expressed sequence tags (ESTs) can bridge genomics and …

A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in Setaria

N Fahlgren, M Feldman, MA Gehan, MS Wilson… - Molecular plant, 2015 - cell.com
Phenotyping has become the rate-limiting step in using large-scale genomic data to
understand and improve agricultural crops. Here, the Bellwether Phenotyping Platform for …

Setaria viridis: A Model for C4 Photosynthesis

TP Brutnell, L Wang, K Swartwood… - The Plant …, 2010 - academic.oup.com
C4 photosynthesis drives productivity in several major food crops and bioenergy grasses,
including maize (Zea mays), sugarcane (Saccharum officinarum), sorghum (Sorghum …

Foxtail millet: a sequence-driven grass model system

AN Doust, EA Kellogg, KM Devos… - Plant physiology, 2009 - academic.oup.com
Foxtail millet (Setaria italica) is a small diploid C4 panicoid crop species, whose genome is
being sequenced by the Joint Genome Institute (JGI) of the Department of Energy. The …

Millets: genetic and genomic resources

SL Dwivedi, HD Upadhyaya, S Senthilvel, CT Hash… - 2012 - oar.icrisat.org
This chapter contains sections titled: Introduction Nutritional Quality and Food, Feed,
Medicinal, and Other Uses Domestication, Phylogenetic, and Genomic Relationships …

Grasses provide new insights into regulation of shoot branching

TH Kebrom, W Spielmeyer, EJ Finnegan - Trends in plant science, 2013 - cell.com
Tillering (branching) is a major determinant of crop yield that is controlled by complex
interactions between hormonal, developmental, and environmental factors. Historically …

Neo-functionalization of a Teosinte branched 1 homologue mediates adaptations of upland rice

J Lyu, L Huang, S Zhang, Y Zhang, W He… - Nature …, 2020 - nature.com
The rice orthologue of maize domestication gene Teosinte branched 1 (Tb1) affects tillering.
But, unlike maize Tb1 gene, it was not selected during domestication. Here, we report that …

Beyond the single gene: How epistasis and gene-by-environment effects influence crop domestication

AN Doust, L Lukens, KM Olsen… - Proceedings of the …, 2014 - National Acad Sciences
Domestication is a multifaceted evolutionary process, involving changes in individual genes,
genetic interactions, and emergent phenotypes. There has been extensive discussion of the …

Architectural evolution and its implications for domestication in grasses

A Doust - Annals of Botany, 2007 - academic.oup.com
Background The cereal crops domesticated from grasses provide a large percentage of the
calories consumed by humans. Domestication and breeding in individual cereals has …