Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown

TJ Colston, CR Jackson - Molecular ecology, 2016 - Wiley Online Library
Vertebrates harbour microbes both internally and externally, and collectively, these
microorganisms (the 'microbiome') contain genes that outnumber the host's genetic …

A slimy business: the future of fish skin microbiome studies

JA Gomez, TP Primm - Microbial ecology, 2021 - Springer
Fish skin contains a mucosal microbiome for the largest and oldest group of vertebrates, a
location ideal for microbial community ecology and practical applications in agriculture and …

Topographical mapping of the rainbow trout (Oncorhynchus mykiss) microbiome reveals a diverse bacterial community with antifungal properties in the skin

L Lowrey, DC Woodhams, L Tacchi… - Applied and …, 2015 - Am Soc Microbiol
The mucosal surfaces of wild and farmed aquatic vertebrates face the threat of many aquatic
pathogens, including fungi. These surfaces are colonized by diverse symbiotic bacterial …

The fish microbiome and its interactions with mucosal tissues

DL Merrifield, A Rodiles - Mucosal health in aquaculture, 2015 - Elsevier
The microbiomes of fish are complex communities comprising protists, yeasts, viruses, and
members of the Bacteria and Archaea. These communities inhabit the skin, gills, and …

Microbiome disruption and recovery in the fish Gambusia affinis following exposure to broad-spectrum antibiotic

JM Carlson, AB Leonard, ER Hyde… - Infection and drug …, 2017 - Taylor & Francis
Antibiotics are a relatively common disturbance to the normal microbiota of humans and
agricultural animals, sometimes resulting in severe side effects such as antibiotic-associated …

Characterization of the skin and gill microbiomes of the farmed seabass (Dicentrarchus labrax) and seabream (Sparus aurata)

D Rosado, M Pérez-Losada, R Severino, J Cable… - Aquaculture, 2019 - Elsevier
There is substantial evidence showing that the microbiome of teleosts plays a key role in
host health and wellbeing. Aquaculture practices increase the risk of dysbiosis (ie microbial …

The skin microbiome of elasmobranchs follows phylosymbiosis, but in teleost fishes, the microbiomes converge

MP Doane, MM Morris, B Papudeshi, L Allen, D Pande… - Microbiome, 2020 - Springer
Background The vertebrate clade diverged into Chondrichthyes (sharks, rays, and chimeras)
and Osteichthyes fishes (bony fishes) approximately 420 mya, with each group …

Teleost skin microbiome: an intimate interplay between the environment and the host immunity

LC Wang, LH Chen, YC Chiu, CY Liou… - Fish & Shellfish …, 2023 - Elsevier
The mucosal microbiome plays a role in regulating host health. The research conducted in
humans and mice has governed and detailed the information on microbiome-host immunity …

The host effects of Gambusia affinis with an antibiotic-disrupted microbiome

JM Carlson, ER Hyde, JF Petrosino… - … and Physiology Part C …, 2015 - Elsevier
While serving as critical tools against bacterial infections, antimicrobial therapies can also
result in serious side effects, such as antibiotic-associated entercolitis. Recent studies …

Mucus glycosylation, immunity and bacterial microbiota associated to the skin of experimentally ulcered gilthead seabream (Sparus aurata)

ST Tapia-Paniagua, D Ceballos-Francisco… - Fish & shellfish …, 2018 - Elsevier
Interest in fish skin immunity and its associated microbiota has greatly increased among
immunologists. The objective of this study is to know if skin ulcers may be associated with …