Transporter proteins as ecological assets and features of microbial eukaryotic Pangenomes

DS Milner, LJ Galindo, NAT Irwin… - Annual Review of …, 2023 - annualreviews.org
Here we review two connected themes in evolutionary microbiology:(a) the nature of gene
repertoire variation within species groups (pangenomes) and (b) the concept of metabolite …

[HTML][HTML] Pangenome analysis reveals the genetic basis for taxonomic classification of the Lactobacillaceae family

A Rajput, SM Chauhan, OS Mohite, JC Hyun… - Food …, 2023 - Elsevier
Lactobacillaceae represent a large family of important microbes that are foundational to the
food industry. Many genome sequences of Lactobacillaceae strains are now available …

Characterization of three rapidly growing novel Mycobacterium species with significant polycyclic aromatic hydrocarbon bioremediation potential

Y Deng, T Mou, J Wang, J Su, Y Yan… - Frontiers in …, 2023 - frontiersin.org
Mycobacterium species exhibit high bioremediation potential for the degradation of
polycyclic aromatic hydrocarbons (PAHs) that are significant environmental pollutants. In this …

[HTML][HTML] Intraspecific microdiversity and ecological drivers of lactic acid bacteria in naturally fermented milk ecosystem

L You, H Jin, LY Kwok, R Lv, Z Zhao, M Bilige, Z Sun… - Science Bulletin, 2023 - Elsevier
Traditional fermented milks are produced by inoculating technique, which selects well-
adapted microorganisms that have been passed on through generations. Few reports have …

A critical evaluation of Mycobacterium bovis pangenomics, with reference to its utility in outbreak investigation

KM Ceres, MJ Stanhope, YT Gröhn - Microbial genomics, 2022 - microbiologyresearch.org
The increased accessibility of next generation sequencing has allowed enough genomes
from a given bacterial species to be sequenced to describe the distribution of genes in the …

Unraveling the epidemiology of Mycobacterium bovis using whole-genome sequencing combined with environmental and demographic data

G Rossi, BBJ Shih, NF Egbe, P Motta… - Frontiers in Veterinary …, 2023 - frontiersin.org
When studying the dynamics of a pathogen in a host population, one crucial question is
whether it transitioned from an epidemic (ie, the pathogen population and the number of …

Whole genome sequencing and comparative genomics of Mycobacterium orygis isolated from different animal hosts to identify specific diagnostic markers

K Karthik, S Subramanian… - Frontiers in Cellular …, 2023 - frontiersin.org
Introduction Mycobacterium orygis, a member of MTBC has been identified in higher
numbers in the recent years from animals of South Asia. Comparative genomics of this …

Rescue of Mycobacterium bovis DNA Obtained from Cultured Samples during Official Surveillance of Animal TB: Key Steps for Robust Whole Genome Sequence …

D Pinto, G Themudo, AC Pereira, A Botelho… - International Journal of …, 2024 - mdpi.com
Epidemiological surveillance of animal tuberculosis (TB) based on whole genome
sequencing (WGS) of Mycobacterium bovis has recently gained track due to its high …

Genetic Features of Mycobacterium avium subsp. paratuberculosis Strains Circulating in the West of France Deciphered by Whole-Genome Sequencing

C Conde, J Thézé, T Cochard, MN Rossignol… - Microbiology …, 2022 - Am Soc Microbiol
Paratuberculosis is a chronic infection of the intestine, mainly the ileum, caused by
Mycobacterium avium subsp. paratuberculosis in cattle and other ruminants. This enzootic …

Pangenomic analysis of the bacterial cellulose-producing genera Komagataeibacter and Novacetimonas

BA Akhoon, Q Qiao, A Stewart, J Chen… - International Journal of …, 2025 - Elsevier
Bacterial cellulose (BC) holds significant commercial potential due to its unique structural
and chemical properties, making it suitable for applications in electronics, medicine, and …