Pathogen typing in the genomics era: MLST and the future of molecular epidemiology

M Pérez-Losada, P Cabezas, E Castro-Nallar… - Infection, Genetics and …, 2013 - Elsevier
Multi-locus sequence typing (MLST) is a high-resolution genetic typing approach to identify
species and strains of pathogens impacting human health, agriculture (animals and plants) …

Current and emerging technologies for rapid detection and characterization of Salmonella in poultry and poultry products

SH Park, M Aydin, A Khatiwara, MC Dolan, DF Gilmore… - Food …, 2014 - Elsevier
Salmonella is the leading cause of foodborne illnesses in the United States, and one of the
main contributors to salmonellosis is the consumption of contaminated poultry and poultry …

Expansion of microbial forensics

SE Schmedes, A Sajantila… - Journal of clinical …, 2016 - Am Soc Microbiol
Microbial forensics has been defined as the discipline of applying scientific methods to the
analysis of evidence related to bioterrorism, biocrimes, hoaxes, or the accidental release of …

High-throughput multilocus sequence typing: bringing molecular typing to the next level

SA Boers, WA Van der Reijden, R Jansen - PloS one, 2012 - journals.plos.org
Multilocus sequence typing (MLST) is a widely used system for typing microorganisms by
sequence analysis of housekeeping genes. The main advantage of MLST in comparison to …

[HTML][HTML] Microbial ecology: where are we now?

LA Boughner, P Singh - Postdoc journal: a journal of postdoctoral …, 2016 - ncbi.nlm.nih.gov
Conventional microbiological methods have been readily taken over by newer molecular
techniques due to the ease of use, reproducibility, sensitivity and speed of working with …

nanoMLST: accurate multilocus sequence typing using Oxford Nanopore Technologies MinION with a dual-barcode approach to multiplex large numbers of samples

CH Liou, HC Wu, YC Liao… - Microbial …, 2020 - microbiologyresearch.org
Multilocus sequence typing (MLST) is one of the most commonly used methods for studying
microbial lineage worldwide. However, the traditional MLST process using Sanger …

Salmonella infections in the domestic fowl.

HL Shivaprasad, U Methner… - Salmonella in domestic …, 2013 - cabidigitallibrary.org
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Page 1 © CAB International 2013. Salmonella in Domestic Animals, 2nd Edition 162 (eds PA …

Multilocus Sequence Typing (MLST) of Staphylococcus aureus

NA Saunders, A Holmes - Methicillin-resistant Staphylococcus aureus …, 2014 - Springer
MLST is a widely accepted method of sequence-based typing that relies on analysis of
relatively conserved genes that encode essential proteins. For Staphylococcus aureus the …

Genotyping Streptococcus Pneumoniae

RE Rayner, J Savill, LM Hafner, F Huygens - Future Microbiology, 2015 - Taylor & Francis
Streptococcus pneumoniae is a potentially deadly human pathogen associated with high
morbidity, mortality and global economic burden. The universally used bacterial genotyping …

[PDF][PDF] Next-generation sequencing workflows in veterinary infection biology: towards validation and quality assurance

S Van Borm, J Wang, F Granberg, A Colling - Rev. Sci. Tech, 2016 - researchgate.net
Recent advancements in DNA sequencing methodologies and sequence data analysis
have revolutionised research in many areas of biology and medicine, including veterinary …