XY Pan, YN Zhang, HB Shen - Journal of proteome research, 2010 - ACS Publications
Protein− protein interaction (PPI) is at the core of the entire interactomic system of any living organism. Although there are many human protein− protein interaction links being …
S Romero‐Molina, YB Ruiz‐Blanco… - Journal of …, 2019 - Wiley Online Library
The prediction of peptide–protein or protein–protein interactions (PPI) is a challenging task, especially if amino acid sequences are the only information available. Machine learning …
Background Although various machine learning-based predictors have been developed for estimating protein–protein interactions, their performances vary with dataset and species …
Background In recent years, biomedical ontologies have become important for describing existing biological knowledge in the form of knowledge graphs. Data mining approaches …
J Yu, M Guo, CJ Needham, Y Huang, L Cai… - …, 2010 - academic.oup.com
Motivation: A number of methods have been reported that predict protein–protein interactions (PPIs) with high accuracy using only simple sequence-based features such as …
Y Li, L Ilie - BMC bioinformatics, 2017 - Springer
Background Proteins perform their functions usually by interacting with other proteins. Predicting which proteins interact is a fundamental problem. Experimental methods are …
Y Li, Z Wang, LP Li, ZH You, WZ Huang, XK Zhan… - Scientific Reports, 2021 - nature.com
Various biochemical functions of organisms are performed by protein–protein interactions (PPIs). Therefore, recognition of protein–protein interactions is very important for …
M Jessulat, S Pitre, Y Gui, M Hooshyar… - Expert opinion on …, 2011 - Taylor & Francis
Introduction: Proteins within the cell act as part of complex networks, which allow pathways and processes to function. Therefore, understanding how proteins interact is a significant …
Y Murakami, K Mizuguchi - BMC bioinformatics, 2014 - Springer
Background Identification of protein-protein interactions (PPIs) is essential for a better understanding of biological processes, pathways and functions. However, experimental …