Targeted capture in evolutionary and ecological genomics

MR Jones, JM Good - Molecular ecology, 2016 - Wiley Online Library
The rapid expansion of next‐generation sequencing has yielded a powerful array of tools to
address fundamental biological questions at a scale that was inconceivable just a few years …

Forest tree genomics: growing resources and applications

DB Neale, A Kremer - Nature Reviews Genetics, 2011 - nature.com
Over the past two decades, research in forest tree genomics has lagged behind that of
model and agricultural systems. However, genomic research in forest trees is poised to enter …

Genomic selection in forest tree breeding

D Grattapaglia, MDV Resende - Tree Genetics & Genomes, 2011 - Springer
Genomic selection (GS) involves selection decisions based on genomic breeding values
estimated as the sum of the effects of genome-wide markers capturing most quantitative trait …

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

D Grattapaglia, RE Vaillancourt, M Shepherd… - Tree Genetics & …, 2012 - Springer
The status of genomics and genetics research in the Myrtaceae, a large family of
dicotyledonous woody plants, is reviewed with Eucalyptus as the focal genus. The family …

Association genetics of complex traits in conifers

DB Neale, O Savolainen - Trends in plant science, 2004 - cell.com
Association studies are becoming the experimental approach of choice to dissect complex
traits in many organisms from humans to model plant systems. The candidate gene based …

Association Genetics in Pinus taeda LI Wood Property Traits

SC González-Martínez, NC Wheeler, E Ersoz… - Genetics, 2007 - academic.oup.com
Genetic association is a powerful method for dissecting complex adaptive traits due to (i) fine-
scale mapping resulting from historical recombination,(ii) wide coverage of phenotypic and …

Nucleotide diversity and linkage disequilibrium in loblolly pine

GR Brown, GP Gill, RJ Kuntz… - Proceedings of the …, 2004 - National Acad Sciences
Outbreeding species with large, stable population sizes, such as widely distributed conifers,
are expected to harbor relatively more DNA sequence polymorphism. Under the neutral …

Forest‐tree population genomics and adaptive evolution

SC González‐Martínez, KV Krutovsky… - New …, 2006 - Wiley Online Library
Forest trees have gained much attention in recent years as nonclassical model eukaryotes
for population, evolutionary and ecological genomic studies. Because of low domestication …

DNA Sequence Variation and Selection of Tag Single-Nucleotide Polymorphisms at Candidate Genes for Drought-Stress Response in Pinus taeda L.

SC González-Martínez, E Ersoz, GR Brown… - Genetics, 2006 - academic.oup.com
Genetic association studies are rapidly becoming the experimental approach of choice to
dissect complex traits, including tolerance to drought stress, which is the most common …

Genomic selection accuracies within and between environments and small breeding groups in white spruce

J Beaulieu, TK Doerksen, J MacKay, A Rainville… - BMC genomics, 2014 - Springer
Background Genomic selection (GS) may improve selection response over conventional
pedigree-based selection if markers capture more detailed information than pedigrees in …