[HTML][HTML] Epigenetic modifications of mRNA and DNA in plants
Advances in the detection and mapping of messenger RNA (mRNA) N 6-methyladenosine
(m 6 A) and 5-methylcytosine (m 5 C), and DNA N 6-methyldeoxyadenosine (6mA) …
(m 6 A) and 5-methylcytosine (m 5 C), and DNA N 6-methyldeoxyadenosine (6mA) …
Navigating the pitfalls of mapping DNA and RNA modifications
Y Kong, EA Mead, G Fang - Nature Reviews Genetics, 2023 - nature.com
Chemical modifications to nucleic acids occur across the kingdoms of life and carry
important regulatory information. Reliable high-resolution mapping of these modifications is …
important regulatory information. Reliable high-resolution mapping of these modifications is …
Web 3DNA 2.0 for the analysis, visualization, and modeling of 3D nucleic acid structures
Abstract Web 3DNA (w3DNA) 2.0 is a significantly enhanced version of the widely used
w3DNA server for the analysis, visualization, and modeling of 3D nucleic-acid-containing …
w3DNA server for the analysis, visualization, and modeling of 3D nucleic-acid-containing …
N6-deoxyadenosine methylation in mammalian mitochondrial DNA
Summary N 6-Methyldeoxyadenosine (6mA) has recently been shown to exist and play
regulatory roles in eukaryotic genomic DNA (gDNA). However, the biological functions of …
regulatory roles in eukaryotic genomic DNA (gDNA). However, the biological functions of …
METTL4-mediated nuclear N6-deoxyadenosine methylation promotes metastasis through activating multiple metastasis-inducing targets
Abstract Background DNA N6-methyldeoxyadenosine (6mA) is rarely present in mammalian
cells and its nuclear role remains elusive. Results Here we show that hypoxia induces …
cells and its nuclear role remains elusive. Results Here we show that hypoxia induces …
Biodiversity-based development and evolution: the emerging research systems in model and non-model organisms
Evolutionary developmental biology, or Evo-Devo for short, has become an established field
that, broadly speaking, seeks to understand how changes in development drive major …
that, broadly speaking, seeks to understand how changes in development drive major …
Long-range single-molecule mapping of chromatin accessibility in eukaryotes
Mapping open chromatin regions has emerged as a widely used tool for identifying active
regulatory elements in eukaryotes. However, existing approaches, limited by reliance on …
regulatory elements in eukaryotes. However, existing approaches, limited by reliance on …
Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA
F Rodriguez, IA Yushenova, D DiCorpo… - Nature …, 2022 - nature.com
DNA modifications are used to regulate gene expression and defend against invading
genetic elements. In eukaryotes, modifications predominantly involve C5-methylcytosine …
genetic elements. In eukaryotes, modifications predominantly involve C5-methylcytosine …
Identification of a DNA N6-adenine methyltransferase complex and its impact on chromatin organization
LY Beh, GT Debelouchina, DM Clay, RE Thompson… - Cell, 2019 - cell.com
Summary DNA N6-adenine methylation (6mA) has recently been described in diverse
eukaryotes, spanning unicellular organisms to metazoa. Here, we report a DNA 6mA …
eukaryotes, spanning unicellular organisms to metazoa. Here, we report a DNA 6mA …
DNA modification readers and writers and their interplay
C Rausch, FD Hastert, MC Cardoso - Journal of molecular biology, 2020 - Elsevier
Abstracts Genomic DNA is modified in a postreplicative manner and several modifications,
the enzymes responsible for their deposition as well as proteins that read these …
the enzymes responsible for their deposition as well as proteins that read these …