[HTML][HTML] Application of next generation sequencing in laboratory medicine

Y Zhong, F Xu, J Wu, J Schubert… - Annals of laboratory …, 2021 - synapse.koreamed.org
The rapid development of next-generation sequencing (NGS) technology, including
advances in sequencing chemistry, sequencing technologies, bioinformatics, and data …

Comparison of next‐generation sequencing systems

L Liu, Y Li, S Li, N Hu, Y He, R Pong… - BioMed research …, 2012 - Wiley Online Library
With fast development and wide applications of next‐generation sequencing (NGS)
technologies, genomic sequence information is within reach to aid the achievement of goals …

[图书][B] Environmental DNA: For biodiversity research and monitoring

P Taberlet, A Bonin, L Zinger, E Coissac - 2018 - books.google.com
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …

AbLang: an antibody language model for completing antibody sequences

TH Olsen, IH Moal, CM Deane - Bioinformatics Advances, 2022 - academic.oup.com
Motivation General protein language models have been shown to summarize the semantics
of protein sequences into representations that are useful for state-of-the-art predictive …

Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees

B Beckers, M Op De Beeck, N Weyens, W Boerjan… - Microbiome, 2017 - Springer
Background The plant microbiome represents one of the key determinants of plant health
and productivity by providing a plethora of functional capacities such as access to low …

Life in the “plastisphere”: microbial communities on plastic marine debris

ER Zettler, TJ Mincer… - Environmental science & …, 2013 - ACS Publications
Plastics are the most abundant form of marine debris, with global production rising and
documented impacts in some marine environments, but the influence of plastic on open …

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform

M Schirmer, UZ Ijaz, R D'Amore, N Hall… - Nucleic acids …, 2015 - academic.oup.com
With read lengths of currently up to 2× 300 bp, high throughput and low sequencing costs
Illumina's MiSeq is becoming one of the most utilized sequencing platforms worldwide. The …

MG-RAST, a metagenomics service for analysis of microbial community structure and function

KP Keegan, EM Glass, F Meyer - Microbial environmental genomics (MEG), 2016 - Springer
Approaches in molecular biology, particularly those that deal with high-throughput
sequencing of entire microbial communities (the field of metagenomics), are rapidly …

[PDF][PDF] Generations of sequencing technologies: from first to next generation

M Kchouk, JF Gibrat, M Elloumi - Biology and Medicine, 2017 - edisciplinas.usp.br
DNA sequencing process utilizes biochemical methods in order to determine the correct
order of nucleotide bases in a DNA macromolecule using sequencing machines. Ten years …

Primer and platform effects on 16S rRNA tag sequencing

J Tremblay, K Singh, A Fern, ES Kirton, S He… - Frontiers in …, 2015 - frontiersin.org
Sequencing of 16S rRNA gene tags is a popular method for profiling and comparing
microbial communities. The protocols and methods used, however, vary considerably with …