Small proteins can no longer be ignored

G Storz, YI Wolf, KS Ramamurthi - Annual review of biochemistry, 2014 - annualreviews.org
Small proteins, here defined as proteins of 50 amino acids or fewer in the absence of
processing, have traditionally been overlooked due to challenges in their annotation and …

Small regulatory RNAs from low-GC Gram-positive bacteria

S Brantl, R Brückner - RNA biology, 2014 - Taylor & Francis
Small regulatory RNAs (sRNAs) that act by base-pairing were first discovered in so-called
accessory DNA elements—plasmids, phages, and transposons—where they control …

A circadian clock in a nonphotosynthetic prokaryote

Z Eelderink-Chen, J Bosman, F Sartor, AN Dodd… - Science …, 2021 - science.org
Circadian clocks create a 24-hour temporal structure, which allows organisms to occupy a
niche formed by time rather than space. They are pervasive throughout nature, yet they …

The Bacillus BioBrick Box: generation and evaluation of essential genetic building blocks for standardized work with Bacillus subtilis

J Radeck, K Kraft, J Bartels, T Cikovic, F Dürr… - Journal of biological …, 2013 - Springer
Background Standardized and well-characterized genetic building blocks are a prerequisite
for the convenient and reproducible assembly of novel genetic modules and devices. While …

A catalog of small proteins from the global microbiome

Y Duan, CD Santos-Júnior, TS Schmidt… - Nature …, 2024 - nature.com
Small open reading frames (smORFs) shorter than 100 codons are widespread and perform
essential roles in microorganisms, where they encode proteins active in several cell …

An RNA-centric global view of Clostridioides difficile reveals broad activity of Hfq in a clinically important gram-positive bacterium

M Fuchs, V Lamm-Schmidt, J Sulzer… - Proceedings of the …, 2021 - National Acad Sciences
The gram-positive human pathogen Clostridioides difficile has emerged as the leading
cause of antibiotic-associated diarrhea. However, little is known about the bacterium's …

A network of small RNAs regulates sporulation initiation in Clostridioides difficile

M Fuchs, V Lamm‐Schmidt, T Lenče, J Sulzer… - The EMBO …, 2023 - embopress.org
The obligate anaerobic, enteric pathogen Clostridioides difficile persists in the intestinal tract
by forming antibiotic‐resistant endospores that contribute to relapsing and recurrent …

Bacillus subtilis σV Confers Lysozyme Resistance by Activation of Two Cell Wall Modification Pathways, Peptidoglycan O-Acetylation and d-Alanylation of Teichoic …

V Guariglia-Oropeza, JD Helmann - Journal of bacteriology, 2011 - Am Soc Microbiol
The seven extracytoplasmic function (ECF) sigma (σ) factors of Bacillus subtilis are broadly
implicated in resistance to antibiotics and other cell envelope stressors mediated, in part, by …

Small bacterial and phagic proteins: an updated view on a rapidly moving field

M Duval, P Cossart - Current opinion in microbiology, 2017 - Elsevier
Highlights•Small proteins can be secreted or not.•Small proteins can be used in
communication between bacteria or phages.•Small proteins can be used as bacteriocins in …

An expanding universe of small proteins

EC Hobbs, F Fontaine, X Yin, G Storz - Current opinion in microbiology, 2011 - Elsevier
Historically, small proteins (sproteins) of less than 50 amino acids, in their final processed
forms or genetically encoded as such, have been understudied. However, both serendipity …