MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes
Complex cellular functions are usually encoded by a set of genes in one or a few organized
genetic loci in microbial genomes. Macromolecular System Finder (MacSyFinder) is a …
genetic loci in microbial genomes. Macromolecular System Finder (MacSyFinder) is a …
Flavobacterium facile sp. nov., isolated from water system of Atlantic salmon (Salmo salar) fry cultured in Chile
R Irgang, M Saldarriaga-Córdoba… - … of Systematic and …, 2024 - microbiologyresearch.org
Strain T-12T, an orange, Gram-stain-negative, non-motile, rod-shaped strain, was isolated in
November 2013 from water samples collected from an Atlantic salmon (Salmo salar) fry …
November 2013 from water samples collected from an Atlantic salmon (Salmo salar) fry …
T9GPred: A Comprehensive Computational Tool for the Prediction of Type 9 Secretion System, Gliding Motility, and the Associated Secreted Proteins
Type 9 secretion system (T9SS) is one of the least characterized secretion systems
exclusively found in the Bacteroidetes phylum, which comprises various environmental and …
exclusively found in the Bacteroidetes phylum, which comprises various environmental and …
Analyses of Xenorhabdus griffiniae genomes reveal two distinct sub-species that display intra-species variation due to prophages.
JK Heppert, RM Awori, M Cao, G Chen, J McLeish… - bioRxiv, 2024 - biorxiv.org
Nematodes of the genus Steinernema and their Xenorhabdus bacterial symbionts are lethal
entomopathogens that are useful in the biocontrol of insect pests, as sources of diverse …
entomopathogens that are useful in the biocontrol of insect pests, as sources of diverse …
Understanding the mechanism of bacterial cGAS immunity and its co-evolution with phage
E Huiting - 2024 - escholarship.org
A fundamental strategy of eukaryotic anti-viral innate immunity involves the cGAS enzyme,
which synthesizes 2', 3'-cGAMP and activates a STING effector to limit viral replication …
which synthesizes 2', 3'-cGAMP and activates a STING effector to limit viral replication …
Pannotator integrated with Medpipe provides immunological and subcellular location features using a microservice
RFM Goncalves, AR Santos - bioRxiv, 2024 - biorxiv.org
Genome sequencing and assembly are trivial tasks nowadays. After assembling contigs and
scaffolds from a genome, the subsequent step is annotation. An annotation evidencing the …
scaffolds from a genome, the subsequent step is annotation. An annotation evidencing the …