Mass spectrometry‐based high‐throughput proteomics and its role in biomedical studies and systems biology

CB Messner, V Demichev, Z Wang, J Hartl… - …, 2023 - Wiley Online Library
There are multiple reasons why the next generation of biological and medical studies
require increasing numbers of samples. Biological systems are dynamic, and the effect of a …

The future of precision oncology

SL Rulten, RP Grose, SA Gatz, JL Jones… - International Journal of …, 2023 - mdpi.com
Our understanding of the molecular mechanisms underlying cancer development and
evolution have evolved rapidly over recent years, and the variation from one patient to …

CRISPR/Cas9 editing of NKG2A improves the efficacy of primary CD33-directed chimeric antigen receptor natural killer cells

T Bexte, N Albinger, A Al Ajami, P Wendel… - Nature …, 2024 - nature.com
Chimeric antigen receptor (CAR)-modified natural killer (NK) cells show antileukemic activity
against acute myeloid leukemia (AML) in vivo. However, NK cell-mediated tumor killing is …

Single-cell landscape of innate and acquired drug resistance in acute myeloid leukemia

R Wegmann, X Bonilla, R Casanova, S Chevrier… - Nature …, 2024 - nature.com
Deep single-cell multi-omic profiling offers a promising approach to understand and
overcome drug resistance in relapsed or refractory (rr) acute myeloid leukemia (AML). Here …

[HTML][HTML] The proteogenomic landscape of multiple myeloma reveals insights into disease biology and therapeutic opportunities

E Ramberger, V Sapozhnikova, YLD Ng, A Dolnik… - Nature cancer, 2024 - nature.com
Multiple myeloma (MM) is a plasma cell malignancy of the bone marrow. Despite therapeutic
advances, MM remains incurable, and better risk stratification as well as new therapies are …

Mitochondrial fusion is a therapeutic vulnerability of acute myeloid leukemia

C Larrue, S Mouche, S Lin, F Simonetta… - Leukemia, 2023 - nature.com
Mitochondrial metabolism recently emerged as a critical dependency in acute myeloid
leukemia (AML). The shape of mitochondria is tightly regulated by dynamin GTPase …

Ion mobility‐resolved phosphoproteomics with dia‐PASEF and short gradients

D Oliinyk, F Meier - Proteomics, 2023 - Wiley Online Library
Mass spectrometry‐based phosphoproteomics has identified> 150,000 post‐translational
phosphorylation sites in the human proteome. To disentangle their functional relevance …

MultiPro: DDA-PASEF and diaPASEF acquired cell line proteomic datasets with deliberate batch effects

H Wang, KP Lim, W Kong, H Gao, BJH Wong, SX Phua… - Scientific Data, 2023 - nature.com
Mass spectrometry-based proteomics plays a critical role in current biological and clinical
research. Technical issues like data integration, missing value imputation, batch effect …

Phenotypically-defined stages of leukemia arrest predict main driver mutations subgroups, and outcome in acute myeloid leukemia

F Vergez, L Largeaud, S Bertoli, ML Nicolau… - Blood cancer …, 2022 - nature.com
Classifications of acute myeloid leukemia (AML) patients rely on morphologic, cytogenetic,
and molecular features. Here we have established a novel flow cytometry-based …

Bidirectional interplay between metabolism and epigenetics in hematopoietic stem cells and leukemia

YW Zhang, K Schönberger… - The EMBO …, 2023 - embopress.org
During the last decades, remarkable progress has been made in further understanding the
complex molecular regulatory networks that maintain hematopoietic stem cell (HSC) …