Synthetic lethality and cancer

NJ O'Neil, ML Bailey, P Hieter - Nature Reviews Genetics, 2017 - nature.com
A synthetic lethal interaction occurs between two genes when the perturbation of either gene
alone is viable but the perturbation of both genes simultaneously results in the loss of …

Network biology concepts in complex disease comorbidities

JX Hu, CE Thomas, S Brunak - Nature Reviews Genetics, 2016 - nature.com
The co-occurrence of diseases can inform the underlying network biology of shared and
multifunctional genes and pathways. In addition, comorbidities help to elucidate the effects …

A global genetic interaction network maps a wiring diagram of cellular function

M Costanzo, B VanderSluis, EN Koch, A Baryshnikova… - Science, 2016 - science.org
INTRODUCTION Genetic interactions occur when mutations in two or more genes combine
to generate an unexpected phenotype. An extreme negative or synthetic lethal genetic …

The causes and consequences of genetic interactions (epistasis)

J Domingo, P Baeza-Centurion… - Annual review of …, 2019 - annualreviews.org
The same mutation can have different effects in different individuals. One important reason
for this is that the outcome of a mutation can depend on the genetic context in which it …

Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review

P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …

Marked for death: targeting epigenetic changes in cancer

SX Pfister, A Ashworth - Nature reviews Drug discovery, 2017 - nature.com
In the past few years, it has become clear that mutations in epigenetic regulatory genes are
common in human cancers. Therapeutic strategies are now being developed to target …

Global genetic networks and the genotype-to-phenotype relationship

M Costanzo, E Kuzmin, J van Leeuwen, B Mair… - Cell, 2019 - cell.com
Genetic interactions identify combinations of genetic variants that impinge on phenotype.
With whole-genome sequence information available for thousands of individuals within a …

[HTML][HTML] Phenotypic landscape of a bacterial cell

RJ Nichols, S Sen, YJ Choo, P Beltrao, M Zietek… - Cell, 2011 - cell.com
The explosion of sequence information in bacteria makes developing high-throughput, cost-
effective approaches to matching genes with phenotypes imperative. Using E. coli as proof …

Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms

T Van Opijnen, KL Bodi, A Camilli - Nature methods, 2009 - nature.com
Biological pathways are structured in complex networks of interacting genes. Solving the
architecture of such networks may provide valuable information, such as how …

Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe

DU Kim, J Hayles, D Kim, V Wood, HO Park… - Nature …, 2010 - nature.com
We report the construction and analysis of 4,836 heterozygous diploid deletion mutants
covering 98.4% of the fission yeast genome providing a tool for studying eukaryotic biology …