Convolutional neural networks for classification of Alzheimer's disease: Overview and reproducible evaluation

J Wen, E Thibeau-Sutre, M Diaz-Melo… - Medical image …, 2020 - Elsevier
Numerous machine learning (ML) approaches have been proposed for automatic
classification of Alzheimer's disease (AD) from brain imaging data. In particular, over 30 …

Assessing and tuning brain decoders: cross-validation, caveats, and guidelines

G Varoquaux, PR Raamana, DA Engemann… - NeuroImage, 2017 - Elsevier
Decoding, ie prediction from brain images or signals, calls for empirical evaluation of its
predictive power. Such evaluation is achieved via cross-validation, a method also used to …

fMRIPrep: a robust preprocessing pipeline for functional MRI

O Esteban, CJ Markiewicz, RW Blair, CA Moodie… - Nature …, 2019 - nature.com
Preprocessing of functional magnetic resonance imaging (fMRI) involves numerous steps to
clean and standardize the data before statistical analysis. Generally, researchers create ad …

Beyond the 30-million-word gap: Children's conversational exposure is associated with language-related brain function

RR Romeo, JA Leonard, ST Robinson… - Psychological …, 2018 - journals.sagepub.com
Children's early language exposure impacts their later linguistic skills, cognitive abilities,
and academic achievement, and large disparities in language exposure are associated with …

Flexible reuse of cortico-hippocampal representations during encoding and recall of naturalistic events

ZM Reagh, C Ranganath - Nature Communications, 2023 - nature.com
Although every life event is unique, there are considerable commonalities across events.
However, little is known about whether or how the brain flexibly represents information about …

MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites

O Esteban, D Birman, M Schaer, OO Koyejo… - PloS one, 2017 - journals.plos.org
Quality control of MRI is essential for excluding problematic acquisitions and avoiding bias
in subsequent image processing and analysis. Visual inspection is subjective and …

THINGS-data, a multimodal collection of large-scale datasets for investigating object representations in human brain and behavior

MN Hebart, O Contier, L Teichmann, AH Rockter… - Elife, 2023 - elifesciences.org
Understanding object representations requires a broad, comprehensive sampling of the
objects in our visual world with dense measurements of brain activity and behavior. Here …

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

KJ Gorgolewski, T Auer, VD Calhoun, RC Craddock… - Scientific data, 2016 - nature.com
The development of magnetic resonance imaging (MRI) techniques has defined modern
neuroimaging. Since its inception, tens of thousands of studies using techniques such as …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for
noninvasively studying the organization of white matter in the human brain. Here we …

How open science helps researchers succeed

EC McKiernan, PE Bourne, CT Brown, S Buck, A Kenall… - elife, 2016 - elifesciences.org
Open access, open data, open source and other open scholarship practices are growing in
popularity and necessity. However, widespread adoption of these practices has not yet been …