Ecological genomics of marine picocyanobacteria

DJ Scanlan, M Ostrowski, S Mazard… - Microbiology and …, 2009 - Am Soc Microbiol
Marine picocyanobacteria of the genera Prochlorococcus and Synechococcus numerically
dominate the picophytoplankton of the world ocean, making a key contribution to global …

Small RNAs as regulators of primary and secondary metabolism in Pseudomonas species

E Sonnleitner, D Haas - Applied microbiology and biotechnology, 2011 - Springer
Small RNAs (sRNAs) exert important functions in pseudomonads. Classical sRNAs
comprise the 4.5 S, 6S, 10Sa and 10Sb RNAs, which are known in enteric bacteria as part of …

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

Z Weinberg, JX Wang, J Bogue, J Yang, K Corbino… - Genome biology, 2010 - Springer
Abstract Background Structured noncoding RNAs perform many functions that are essential
for protein synthesis, RNA processing, and gene regulation. Structured RNAs can be …

Genome Diversity of Pseudomonas aeruginosa PAO1 Laboratory Strains

J Klockgether, A Munder, J Neugebauer… - Journal of …, 2010 - Am Soc Microbiol
Pseudomonas aeruginosa PAO1 is the most commonly used strain for research on this
ubiquitous and metabolically versatile opportunistic pathogen. Strain PAO1, a derivative of …

The Pseudomonas aeruginosa Transcriptome in Planktonic Cultures and Static Biofilms Using RNA Sequencing

A Dötsch, D Eckweiler, M Schniederjans… - PloS one, 2012 - journals.plos.org
In this study, we evaluated how gene expression differs in mature Pseudomonas aeruginosa
biofilms as opposed to planktonic cells by the use of RNA sequencing technology that gives …

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa

LP Allsopp, TE Wood, SA Howard… - Proceedings of the …, 2017 - National Acad Sciences
The type VI secretion system (T6SS) is a weapon of bacterial warfare and host cell
subversion. The Gram-negative pathogen Pseudomonas aeruginosa has three T6SSs …

The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal

E Sonnleitner, N Gonzalez… - Molecular …, 2011 - Wiley Online Library
Quorum sensing, a cell‐to‐cell communication system based on small signal molecules, is
employed by the human pathogen Pseudomonas aeruginosa to regulate virulence and …

Regulatory RNAs and the HptB/RetS signalling pathways fine‐tune Pseudomonas aeruginosa pathogenesis

C Bordi, MC Lamy, I Ventre, E Termine… - Molecular …, 2010 - Wiley Online Library
Bacterial pathogenesis often depends on regulatory networks, two‐component systems and
small RNAs (sRNAs). In Pseudomonas aeruginosa, the RetS sensor pathway …

Physiological roles of small RNA molecules

C Michaux, N Verneuil, A Hartke, JC Giard - Microbiology, 2014 - microbiologyresearch.org
Unlike proteins, RNA molecules have emerged lately as key players in regulation in
bacteria. Most reviews hitherto focused on the experimental and/or in silico methods used to …

Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf‐5 has far‐reaching transcriptomic consequences

KA Hassan, A Johnson, BT Shaffer… - Environmental …, 2010 - Wiley Online Library
Summary The GacS/GacA signal transduction system is a central regulator in Pseudomonas
spp., including the biological control strain P. fluorescens Pf‐5, in which GacS/GacA controls …