A review on the applications of next generation sequencing technologies as applied to food-related microbiome studies

Y Cao, S Fanning, S Proos, K Jordan… - Frontiers in …, 2017 - frontiersin.org
The development of next generation sequencing (NGS) techniques has enabled
researchers to study and understand the world of microorganisms from broader and deeper …

[HTML][HTML] Current perspectives of the chicken gastrointestinal tract and its microbiome

D Borda-Molina, J Seifert, A Camarinha-Silva - … and structural biotechnology …, 2018 - Elsevier
The microbial communities inhabiting the gastrointestinal tract (GIT) of chickens are
essential for the gut homeostasis, the host metabolism and affect the animals' physiology …

A novel porcine circovirus distantly related to known circoviruses is associated with porcine dermatitis and nephropathy syndrome and reproductive failure

R Palinski, P Piñeyro, P Shang, F Yuan, R Guo… - Journal of …, 2017 - Am Soc Microbiol
Porcine circovirus-associated disease (PCVAD) is clinically manifested by postweaning
multisystemic wasting syndrome (PMWS), respiratory and enteric disease, reproductive …

Detection of a novel circovirus PCV3 in pigs with cardiac and multi-systemic inflammation

TG Phan, F Giannitti, S Rossow, D Marthaler… - Virology journal, 2016 - Springer
Background Porcine circovirus 2 causes different clinical syndromes resulting in a significant
economic loss in the pork industry. Three pigs with unexplained cardiac and multi-organ …

Phage biocontrol applications in food production and processing

A Vikram, J Woolston, A Sulakvelidze - Current issues in molecular …, 2021 - mdpi.com
Bacteriophages, or phages, are one of the most–if not the most–ubiquitous organisms on
Earth. Interest in various practical applications of bacteriophages has been gaining …

Identification and genetic characterization of porcine circovirus type 3 in China

X Ku, F Chen, P Li, Y Wang, X Yu, S Fan… - Transboundary and …, 2017 - Wiley Online Library
A novel circovirus called porcine circovirus type 3 (PCV 3) was recently reported to exist in
the USA. This circovirus is associated with porcine dermatitis, nephropathy syndrome and …

A metagenomics and case-control study to identify viruses associated with bovine respiratory disease

TFF Ng, NO Kondov, X Deng… - Journal of …, 2015 - Am Soc Microbiol
Bovine respiratory disease (BRD) is a common health problem for both dairy and beef cattle,
resulting in significant economic loses. In order to identify viruses associated with BRD, we …

First detection of porcine circovirus type 3 on commercial pig farms in Poland

T Stadejek, A Woźniak, D Miłek… - … and emerging diseases, 2017 - Wiley Online Library
Summary Porcine circovirus type 3 (PCV 3) is a novel circovirus species recently discovered
in USA and China in cases of porcine dermatitis and nephropathy syndrome, reproductive …

The ancient evolutionary history of polyomaviruses

CB Buck, K Van Doorslaer, A Peretti… - PLoS …, 2016 - journals.plos.org
Polyomaviruses are a family of DNA tumor viruses that are known to infect mammals and
birds. To investigate the deeper evolutionary history of the family, we used a combination of …

Metagenomic characterization of the virome associated with bovine respiratory disease in feedlot cattle identified novel viruses and suggests an etiologic role for …

N Mitra, N Cernicchiaro, S Torres… - Journal of General …, 2016 - microbiologyresearch.org
Bovine respiratory disease (BRD) is the most costly disease affecting the cattle industry. The
pathogenesis of BRD is complex and includes contributions from microbial pathogens as …