Colicin biology

E Cascales, SK Buchanan, D Duché… - Microbiology and …, 2007 - Am Soc Microbiol
Colicins are proteins produced by and toxic for some strains of Escherichia coli. They are
produced by strains of E. coli carrying a colicinogenic plasmid that bears the genetic …

Homing endonuclease structure and function

BL Stoddard - Quarterly reviews of biophysics, 2005 - cambridge.org
Homing endonucleases are encoded by open reading frames that are embedded within
group I, group II and archael introns, as well as inteins (intervening sequences that are …

Programmable RNA recognition and cleavage by CRISPR/Cas9

MR O'Connell, BL Oakes, SH Sternberg… - Nature, 2014 - nature.com
The CRISPR-associated protein Cas9 is an RNA-guided DNA endonuclease that uses RNA–
DNA complementarity to identify target sites for sequence-specific double-stranded DNA …

Identification of multiple distinct Snf2 subfamilies with conserved structural motifs

A Flaus, DMA Martin, GJ Barton… - Nucleic acids …, 2006 - academic.oup.com
The Snf2 family of helicase-related proteins includes the catalytic subunits of ATP-
dependent chromatin remodelling complexes found in all eukaryotes. These act to regulate …

Trashing the genome: the role of nucleases during apoptosis

K Samejima, WC Earnshaw - Nature reviews Molecular cell biology, 2005 - nature.com
Two classes of nucleases degrade the cellular DNA during apoptosis. Cell-autonomous
nucleases cleave DNA within the dying cell. They are not essential for apoptotic cell death or …

Method for the generation of compact TALE-nucleases and uses thereof

P Duchateau, J Valton, C Bertonati, JC Epinat… - US Patent …, 2016 - Google Patents
The present invention relates to a method for the generation of compact Transcription
Activator-Like Effector Nucleases (TALENs) that can efficiently target and process double …

An equivalent metal ion in one-and two-metal-ion catalysis

W Yang - Nature structural & molecular biology, 2008 - nature.com
Nucleotidyl-transfer enzymes, which synthesize, degrade and rearrange DNA and RNA,
often depend on metal ions for catalysis. All DNA and RNA polymerases, MutH-like or …

DNA binding and cleavage by the HNH homing endonuclease I-HmuI

BW Shen, M Landthaler, DA Shub… - Journal of molecular …, 2004 - Elsevier
The structure of I-HmuI, which represents the last family of homing endonucleases without a
defining crystallographic structure, has been determined in complex with its DNA target. A …

Domain structure and three-dimensional model of a group II intron-encoded reverse transcriptase

FJH Blocker, G Mohr, LH Conlan, LI Qi, M Belfort… - Rna, 2005 - rnajournal.cshlp.org
Group II intron-encoded proteins (IEPs) have both reverse transcriptase (RT) activity, which
functions in intron mobility, and maturase activity, which promotes RNA splicing by …

Nuclease colicins and their immunity proteins

G Papadakos, JA Wojdyla… - Quarterly reviews of …, 2012 - cambridge.org
It is more than 80 years since Gratia first described 'a remarkable antagonism between two
strains of Escherichia coli'. Shown subsequently to be due to the action of proteins (or …