Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications

GK Savova, JJ Masanz, PV Ogren… - Journal of the …, 2010 - academic.oup.com
We aim to build and evaluate an open-source natural language processing system for
information extraction from electronic medical record clinical free-text. We describe and …

Recognizing obesity and comorbidities in sparse data

Ö Uzuner - Journal of the American Medical Informatics …, 2009 - academic.oup.com
In order to survey, facilitate, and evaluate studies of medical language processing on clinical
narratives, i2b2 (Informatics for Integrating Biology to the Bedside) organized its second …

A translational engine at the national scale: informatics for integrating biology and the bedside

IS Kohane, SE Churchill… - Journal of the American …, 2012 - academic.oup.com
Informatics for integrating biology and the bedside (i2b2) seeks to provide the
instrumentation for using the informational by-products of health care and the biological …

[HTML][HTML] Developing a FHIR-based EHR phenotyping framework: A case study for identification of patients with obesity and multiple comorbidities from discharge …

N Hong, A Wen, DJ Stone, S Tsuji, PR Kingsbury… - Journal of biomedical …, 2019 - Elsevier
Background Standards-based clinical data normalization has become a key component of
effective data integration and accurate phenotyping for secondary use of electronic …

Evaluation of a generalizable approach to clinical information retrieval using the automated retrieval console (ARC)

LW D'Avolio, TM Nguyen, WR Farwell… - Journal of the …, 2010 - academic.oup.com
Reducing custom software development effort is an important goal in information retrieval
(IR). This study evaluated a generalizable approach involving with no custom software or …

Uncertainty detection in natural language texts

V Vincze - 2014 - search.proquest.com
In this thesis, we aimed at detecting uncertainty in English and Hungarian natural language
texts. This research question can be investigated from a dual perspective since it is situated …

Automated discovery of drug treatment patterns for endocrine therapy of breast cancer within an electronic medical record

GK Savova, JE Olson, SP Murphy… - Journal of the …, 2012 - academic.oup.com
Objective To develop an algorithm for the discovery of drug treatment patterns for endocrine
breast cancer therapy within an electronic medical record and to test the hypothesis that …

Semi-automated construction of decision rules to predict morbidities from clinical texts

R Farkas, G Szarvas, I Hegedűs… - Journal of the …, 2009 - academic.oup.com
Objective: In this study the authors describe the system submitted by the team of University
of Szeged to the second i2b2 Challenge in Natural Language Processing for Clinical Data …

The effect of text data augmentation methods and strategies in classification tasks of unstructured medical notes

H Lu, C Rakovski - 2022 - researchsquare.com
Background Text classification tasks of unstructured medical notes are often challenged with
the issues of highly imbalanced classes and/or small sample sizes. Data augmentation is a …

[PDF][PDF] Impact des informations sémantiques sur la catégorisation automatique des documents cliniques.

N Grabar, T Hamon - TIA, 2009 - irit.fr
Le codage des comptes-rendus cliniques est une tâche réalisée quotidiennement dans les
hôpitaux. Nous proposons d'étudier l'influence que les informations sémantiques peuvent …