Origin and evolution of the ribosome

GE Fox - Cold Spring Harbor perspectives in biology, 2010 - cshperspectives.cshlp.org
The modern ribosome was largely formed at the time of the last common ancestor, LUCA.
Hence its earliest origins likely lie in the RNA world. Central to its development were RNAs …

The energy landscape of the ribosome

S Byju, A Hassan, PC Whitford - Biopolymers, 2024 - Wiley Online Library
The ribosome is a prototypical assembly that can be used to establish general principles
and techniques for the study of biological molecular machines. Motivated by the fact that the …

Peptide bond formation mechanism catalyzed by ribosome

K Swiderek, S Marti, I Tunon, V Moliner… - Journal of the American …, 2015 - ACS Publications
In this paper we present a study of the peptide bond formation reaction catalyzed by
ribosome. Different mechanistic proposals have been explored by means of Free Energy …

Breaking the Mirror: pH‐Controlled Chirality Generation from a meso Ligand to a Racemic Ligand

L Zhang, J Zhang, ZJ Li, YY Qin… - … –A European Journal, 2009 - Wiley Online Library
To study the conversion from a meso form to a racemic form of tetrahydrofurantetracarboxylic
acid (H4L), seven novel coordination polymers were synthesized by the hydrothermal …

[图书][B] Chirality in Biological Nanospaces

N Nandi, K Thirumoorthy - 2012 - api.taylorfrancis.com
The relationship of molecular chirality and biology is intriguing. Our curiosity prompts the
question as to why diverse natural biological molecules are overwhelmingly dissymmetric. Is …

Quantum-mechanical study on the mechanism of peptide bond formation in the ribosome

C Acosta-Silva, J Bertran, V Branchadell… - Journal of the American …, 2012 - ACS Publications
Ribosomes transform the genetic information encoded within genes into proteins. In recent
years, there has been much progress in the study of this complex molecular machine, but …

Chirality and protein biosynthesis

SD Banik, N Nandi - Biochirality: Origins, Evolution and Molecular …, 2013 - Springer
Chirality is present at all levels of structural hierarchy of protein and plays a significant role in
protein biosynthesis. The macromolecules involved in protein biosynthesis such as …

A kinetic resolution accompanied chirality transformation process for asymmetric synthesis of chiral phenol, oxaziridine, and α-hydroxyl cyclic ketone

P Wang, X Zhang, L Wang, R Wang, D Yang - Science China Chemistry, 2024 - Springer
Chirality transformation is a basic, attractive, and important strategy for obtaining
enantioenriched products with desired chiral elements. The reported chirality conversion …

Mechanistic alternatives for peptide bond formation on the ribosome

M Kazemi, J Sočan, F Himo, J Åqvist - Nucleic Acids Research, 2018 - academic.oup.com
The peptidyl transfer reaction on the large ribosomal subunit depends on the protonation
state of the amine nucleophile and exhibits a large kinetic solvent isotope effect (KSIE∼ 8) …

Chiral discrimination in the confined environment of biological nanospace: reactions and interactions involving amino acids and peptides

N Nandi - International Reviews in Physical Chemistry, 2009 - Taylor & Francis
Although chiral discrimination in biological systems is overwhelmingly present, its molecular
mechanism remained a puzzle. Why the basic blocks of life like l-amino acid and d-sugar …