Pushing the frontiers of biodiversity research: Unveiling the global diversity, distribution, and conservation of fungi

T Niskanen, R Lücking, A Dahlberg… - Annual review of …, 2023 - annualreviews.org
Fungi comprise approximately 20% of all eukaryotic species and are connected to virtually
all life forms on Earth. Yet, their diversity remains contentious, their distribution elusive, and …

Metabolomics and genomics in natural products research: complementary tools for targeting new chemical entities

LK Caesar, R Montaser, NP Keller… - Natural product reports, 2021 - pubs.rsc.org
Covering: 2010 to 2021 Organisms in nature have evolved into proficient synthetic chemists,
utilizing specialized enzymatic machinery to biosynthesize an inspiring diversity of …

[HTML][HTML] Developing fungal heterologous expression platforms to explore and improve the production of natural products from fungal biodiversity

X Meng, Y Fang, M Ding, Y Zhang, K Jia, Z Li… - Biotechnology …, 2022 - Elsevier
Natural products from fungi represent an important source of biologically active metabolites
notably for therapeutic agent development. Genome sequencing revealed that the number …

Mining natural products for advanced biofuels and sustainable bioproducts

X Li, AE Gadar-Lopez, L Chen, S Jayachandran… - Current Opinion in …, 2023 - Elsevier
Highlights•Natural products offer a broad chemical catalog for bio-based product
development.•Genome mining tools for identifying BGCs.•Isoprenoid, nonribosomal peptide …

The year 2020 in natural product bioinformatics: an overview of the latest tools and databases

MH Medema - Natural Product Reports, 2021 - pubs.rsc.org
Covering: 2020 Bioinformatic approaches to document and analyse chemical structures,
biosynthetic gene clusters and analytical data play an important role in the study of natural …

The confluence of big data and evolutionary genome mining for the discovery of natural products

MG Chevrette, A Gavrilidou, S Mantri… - Natural product …, 2021 - pubs.rsc.org
This review covers literature between 2003–2021 The development and application of
genome mining tools has given rise to ever-growing genetic and chemical databases and …

Metagenomics Shines Light on the Evolution of “Sunscreen” Pigment Metabolism in the Teloschistales (Lichen-Forming Ascomycota)

T Llewellyn, RW Nowell, A Aptroot… - Genome Biology and …, 2023 - academic.oup.com
Fungi produce a vast number of secondary metabolites that shape their interactions with
other organisms and the environment. Characterizing the genes underpinning metabolite …

Depside and depsidone synthesis in lichenized fungi comes into focus through a genome-wide comparison of the olivetoric acid and physodic acid chemotypes of …

G Singh, D Armaleo, F Dal Grande, I Schmitt - Biomolecules, 2021 - mdpi.com
Primary biosynthetic enzymes involved in the synthesis of lichen polyphenolic compounds
depsides and depsidones are non-reducing polyketide synthases (NR-PKSs), and …

Fungal BGCs for production of secondary metabolites: main types, central roles in strain improvement, and regulation according to the piano principle

AA Zhgun - International Journal of Molecular Sciences, 2023 - mdpi.com
Filamentous fungi are one of the most important producers of secondary metabolites. Some
of them can have a toxic effect on the human body, leading to diseases. On the other hand …

Dereplication of fungal metabolites by NMR-based compound networking using MADByTE

L Flores-Bocanegra, ZY Al Subeh… - Journal of natural …, 2022 - ACS Publications
Strategies for natural product dereplication are continually evolving, essentially in lock step
with advances in MS and NMR techniques. MADByTE is a new platform designed to identify …