Comprehensive review on single-cell RNA sequencing: A new frontier in Alzheimer's disease research

W Jin, JJ Pei, JR Roy, S Jayaraman, RM Ahalliya… - Ageing Research …, 2024 - Elsevier
Alzheimer's disease (AD) is a multifaceted neurodegenerative condition marked by gradual
cognitive deterioration and the loss of neurons. While conventional bulk RNA sequencing …

Single‐cell proteomics by mass spectrometry: Advances and implications in cancer research

YC Tan, TY Low, PY Lee, LC Lim - Proteomics, 2024 - Wiley Online Library
Cancer harbours extensive proteomic heterogeneity. Inspired by the prior success of single‐
cell RNA sequencing (scRNA‐seq) in characterizing minute transcriptomics heterogeneity in …

Analysis of candidate genes for cleft lip±cleft palate using murine single-cell expression data

A Siewert, B Reiz, C Krug, J Heggemann… - Frontiers in Cell and …, 2023 - frontiersin.org
Introduction: Cleft lip±cleft palate (CL/P) is one of the most common birth defects. Although
research has identified multiple genetic risk loci for different types of CL/P (ie, syndromic or …

Bioinformatics for wet-lab scientists: practical application in sequencing analysis

V Laub, K Devraj, L Elias, D Schulte - BMC genomics, 2023 - Springer
Background Genomics data is available to the scientific community after publication of
research projects and can be investigated for a multitude of research questions. However, in …

Cortical type: a conceptual tool for meaningful biological interpretation of high-throughput gene expression data in the human cerebral cortex

A Sancha-Velasco, A Uceda-Heras… - Frontiers in …, 2023 - frontiersin.org
The interpretation of massive high-throughput gene expression data requires computational
and biological analyses to identify statistically and biologically significant differences …

Discovery of a Novel Intron in US10/US11/US12 of HSV-1 Strain 17

W Chang, M Hao, J Qiu, BT Sherman, T Imamichi - Viruses, 2023 - mdpi.com
Herpes Simplex Virus type 1 (HSV-1) infects humans and causes a variety of clinical
manifestations. Many HSV-1 genomes have been sequenced with high-throughput …

RevGel-seq: instrument-free single-cell RNA sequencing using a reversible hydrogel for cell-specific barcoding

J Komatsu, A Cico, R Poncin, M Le Bohec, J Morf… - Scientific Reports, 2023 - nature.com
Progress in sample preparation for scRNA-seq is reported based on RevGel-seq, a
reversible-hydrogel technology optimized for samples of fresh cells. Complexes of one cell …

scEM: A New Ensemble Framework for Predicting Cell Type Composition Based on scRNA-Seq Data

X Cai, W Zhang, X Zheng, Y Xu, Y Li - … Sciences: Computational Life …, 2024 - Springer
With the advent of single-cell RNA sequencing (scRNA-seq) technology, many scRNA-seq
data have become available, providing an unprecedented opportunity to explore cellular …

[HTML][HTML] High-throughput gene expression analysis with TempO-LINC sensitively resolves complex brain, lung and kidney heterogeneity at single-cell resolution

DJ Eastburn, KS White, ND Jayne, S Camiolo, G Montis… - bioRxiv, 2024 - ncbi.nlm.nih.gov
We report the development and performance of a novel genomics platform, TempO-LINC, for
conducting high-throughput transcriptomic analysis on single cells and nuclei. TempO-LINC …

[PDF][PDF] AN EARLY RNA-SEQ DETECTION SYSTEM FOR BREAST TUMOURS BASED ON MACHINE LEARNING

AM ALEESA, AA MOHAMMED… - Journal of Engineering …, 2024 - jestec.taylors.edu.my
Cancer, a pervasive global health issue, accounts for approximately 9 million deaths
annually. The survival rate of cancer patients significantly improves with early detection and …