Semiclassical path integral dynamics: Photosynthetic energy transfer with realistic environment interactions

MK Lee, P Huo, DF Coker - Annual review of physical chemistry, 2016 - annualreviews.org
This article reviews recent progress in the theoretical modeling of excitation energy transfer
(EET) processes in natural light harvesting complexes. The iterative partial linearized …

Quantum and semiclassical dynamical studies of nonadiabatic processes in solution: achievements and perspectives

F Santoro, JA Green, L Martinez-Fernandez… - Physical Chemistry …, 2021 - pubs.rsc.org
We concisely review the main methodological approaches to model nonadiabatic dynamics
in isotropic solutions and their applications. Three general classes of models are identified …

[HTML][HTML] On the advantages of exploiting memory in Markov state models for biomolecular dynamics

S Cao, A Montoya-Castillo, W Wang… - The Journal of …, 2020 - pubs.aip.org
Biomolecular dynamics play an important role in numerous biological processes. Markov
State Models (MSMs) provide a powerful approach to study these dynamic processes by …

[HTML][HTML] Spin-mapping approach for nonadiabatic molecular dynamics

JE Runeson, JO Richardson - The Journal of chemical physics, 2019 - pubs.aip.org
We propose a trajectory-based method for simulating nonadiabatic dynamics in molecular
systems with two coupled electronic states. Employing a quantum-mechanically exact …

Benchmarking quasiclassical mapping Hamiltonian methods for simulating electronically nonadiabatic molecular dynamics

X Gao, MAC Saller, Y Liu, A Kelly… - Journal of Chemical …, 2020 - ACS Publications
Quasi-classical mapping Hamiltonian methods have recently emerged as a promising
approach for simulating electronically nonadiabatic molecular dynamics. The classical-like …

Tensor-train thermo-field memory kernels for generalized quantum master equations

N Lyu, E Mulvihill, MB Soley, E Geva… - Journal of Chemical …, 2023 - ACS Publications
The generalized quantum master equation (GQME) approach provides a rigorous
framework for deriving the exact equation of motion for any subset of electronic reduced …

[HTML][HTML] On the identity of the identity operator in nonadiabatic linearized semiclassical dynamics

MAC Saller, A Kelly, JO Richardson - The Journal of chemical physics, 2019 - pubs.aip.org
Simulating the nonadiabatic dynamics of condensed-phase systems continues to pose a
significant challenge for quantum dynamics methods. Approaches based on sampling …

A new perspective for nonadiabatic dynamics with phase space mapping models

X He, J Liu - The Journal of Chemical Physics, 2019 - pubs.aip.org
Based on the recently developed unified theoretical framework [J. Liu, J. Chem. Phys. 145
(20), 204105 (2016)], we propose a new perspective for studying nonadiabatic dynamics …

A road map to various pathways for calculating the memory kernel of the generalized quantum master equation

E Mulvihill, E Geva - The Journal of Physical Chemistry B, 2021 - ACS Publications
The generalized quantum master equation (GQME) provides a powerful framework for
simulating electronic energy, charge, and coherence transfer dynamics in molecular …

[HTML][HTML] Simulating energy transfer dynamics in the Fenna–Matthews–Olson complex via the modified generalized quantum master equation

E Mulvihill, KM Lenn, X Gao, A Schubert… - The Journal of …, 2021 - pubs.aip.org
The generalized quantum master equation (GQME) provides a general and formally exact
framework for simulating the reduced dynamics of open quantum systems. The recently …