Covalent small-molecule inhibitors of SARS-CoV-2 Mpro: insights into their design, classification, Biological Activity, and binding interactions

AM Shawky, FA Almalki, HA Alzahrani… - European Journal of …, 2024 - Elsevier
Since 2020, many compounds have been investigated for their potential use in the treatment
of SARS-CoV-2 infection. Among these agents, a huge number of natural products and FDA …

SARS-CoV-2 Mpro responds to oxidation by forming disulfide and NOS/SONOS bonds

PYA Reinke, R Schubert, D Oberthür… - Nature …, 2024 - nature.com
The main protease (Mpro) of SARS-CoV-2 is critical for viral function and a key drug target.
Mpro is only active when reduced; turnover ceases upon oxidation but is restored by re …

Cathepsin-Targeting SARS-CoV-2 Inhibitors: Design, Synthesis, and Biological Activity

P Flury, J Breidenbach, N Krüger… - ACS Pharmacology & …, 2024 - ACS Publications
Cathepsins (Cats) are proteases that mediate the successful entry of SARS-CoV-2 into host
cells. We designed and synthesized a tailored series of 21 peptidomimetics and evaluated …

SiteMine: Large‐scale binding site similarity searching in protein structure databases

T Reim, C Ehrt, J Graef, S Günther… - Archiv der …, 2024 - Wiley Online Library
Drug discovery and design challenges, such as drug repurposing, analyzing protein–ligand
and protein–protein complexes, ligand promiscuity studies, or function prediction, can be …

Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors

S Falke, J Lieske, A Herrmann, J Loboda… - Journal of Medicinal …, 2024 - ACS Publications
Emerging RNA viruses, including SARS-CoV-2, continue to be a major threat. Cell entry of
SARS-CoV-2 particles via the endosomal pathway involves cysteine cathepsins. Due to …

De novo design of potential peptide analogs against the main protease of Omicron variant using in silico studies

SP ML, S Kumari, TA Martinek, E Sobhia - … Chemistry Chemical Physics, 2024 - pubs.rsc.org
SARS-CoV-2 and its variants are crossing the immunity barrier induced through vaccination.
Recent Omicron sub-variants are highly transmissible and have a low mortality rate. Despite …

[PDF][PDF] SARS-CoV-2 Mpro responds to oxidation by forming disulfide and NOS/SONOS bonds

G Park, CCB Great Abington - scienceopen.com
Figure S1. Crystal morphology of Mpro crystallized in two space groups, grown under the
same conditions but with different seeds.(A, B) Reduced Mpro crystals in the monoclinic (C2) …