Whole genome sequencing reveals population diversity and variation in HIV-1 specific host genes

PK Thami, WT Choga, C Dandara, SJ O'Brien… - Frontiers in …, 2023 - frontiersin.org
HIV infection continues to be a major global public health issue. The population
heterogeneity in susceptibility or resistance to HIV-1 and progression upon infection is …

Extended high viremics: a substantial fraction of individuals maintain high plasma viral RNA levels after acute HIV-1 subtype C infection

V Novitsky, T Ndung'u, R Wang, H Bussmann… - Aids, 2011 - journals.lww.com
Objective: The present study addressed two questions: what fraction of individuals maintain
a sustained high HIV-1 RNA load after the acute HIV-1C infection peak and how long is a …

HIV-1 subtype C-infected individuals maintaining high viral load as potential targets for the “test-and-treat” approach to reduce HIV transmission

V Novitsky, R Wang, H Bussmann, S Lockman… - PLoS …, 2010 - journals.plos.org
The first aim of the study is to assess the distribution of HIV-1 RNA levels in subtype C
infection. Among 4,348 drug-naïve HIV-positive individuals participating in clinical studies in …

Sample size considerations in the design of cluster randomized trials of combination HIV prevention

R Wang, R Goyal, Q Lei, M Essex… - Clinical trials, 2014 - journals.sagepub.com
Background Cluster randomized trials have been utilized to evaluate the effectiveness of
HIV prevention strategies on reducing incidence. Design of such studies must take into …

Phylogenetic relatedness of circulating HIV-1C variants in Mochudi, Botswana

V Novitsky, H Bussmann, A Logan, S Moyo… - PLoS …, 2013 - journals.plos.org
Background Determining patterns of HIV transmission is increasingly important for the most
efficient use of modern prevention interventions. HIV phylogeny can provide a better …

Transmission of single and multiple viral variants in primary HIV-1 subtype C infection

V Novitsky, R Wang, L Margolin, J Baca… - PLoS …, 2011 - journals.plos.org
To address whether sequences of viral gag and env quasispecies collected during the early
post-acute period can be utilized to determine multiplicity of transmitted HIV's, recently …

Viral load and CD4+ T-cell dynamics in primary HIV-1 subtype C infection

V Novitsky, E Woldegabriel… - JAIDS Journal of …, 2009 - journals.lww.com
Background: Most knowledge of primary HIV-1 infection is based on subtype B studies,
whereas the evolution of viral parameters in the early phase of HIV-1 subtype C infection is …

Screening for 'window‐period'acute HIV infection among pregnant women in rural South Africa

ABM Kharsany, N Hancock, JA Frohlich… - HIV …, 2010 - Wiley Online Library
Objectives The aim of this study was to evaluate the HIV‐1 RNA pooled nucleic acid
amplification testing (NAAT) strategy to screen pregnant women in the 'window period'of …

Intra-host evolutionary rates in HIV-1C env and gag during primary infection

V Novitsky, R Wang, R Rossenkhan, S Moyo… - Infection, Genetics and …, 2013 - Elsevier
Background HIV-1 nucleotide substitution rates are central for understanding the evolution
of HIV-1. Their accurate estimation is critical for analysis of viral dynamics, identification of …

Genome-wide analyses reveal gene influence on HIV disease progression and HIV-1C acquisition in Southern Africa

W Xie, D Agniel, A Shevchenko, SV Malov… - AIDS research and …, 2017 - liebertpub.com
Abstract Sub-Saharan Africans infected with HIV-1C make up the largest AIDS patient
population in the world and exhibit large heterogeneity in disease progression before …