Mapping the human brain proteome: opportunities, challenges, and clinical potential

P Cartas-Cejudo, A Cortes… - Expert Review of …, 2024 - Taylor & Francis
Introduction Due to the segmented functions and complexity of the human brain, the
characterization of molecular profiles within specific areas such as brain structures and …

HAVOC: Small-scale histomic mapping of cancer biodiversity across large tissue distances using deep neural networks

A Dent, K Faust, KHB Lam, N Alhangari, AJ Leon… - Science …, 2023 - science.org
Intratumoral heterogeneity can wreak havoc on current precision medicine strategies
because of challenges in sufficient sampling of geographically separated areas of …

Identifying novel proteins for suicide attempt by integrating proteomes from brain and blood with genome-wide association data

H Zhao, Y Liu, X Zhang, Y Liao, H Zhang… - …, 2024 - nature.com
Genome-wide association studies (GWASs) have identified risk loci for suicide attempt (SA),
but deciphering how they confer risk for SA remains largely unknown. This study aims to …

Standardizing analysis of intra‐tumoral heterogeneity with computational pathology

A Paliwal, K Faust, A Alshoumer… - Genes, Chromosomes …, 2023 - Wiley Online Library
Many malignant cancers like glioblastoma are highly adaptive diseases that dynamically
change their regional biology to survive and thrive under diverse microenvironmental and …

Niche deconvolution of the glioblastoma proteome reveals a distinct infiltrative phenotype within the proneural transcriptomic subgroup

KHB Lam, P Diamandis - Scientific Data, 2022 - nature.com
Glioblastoma is often subdivided into three transcriptional subtypes (classical, proneural,
mesenchymal) based on bulk RNA signatures that correlate with distinct genetic and clinical …

HAVOC: Small-scale histomic mapping of biodiversity across entire tumor specimens using deep neural networks

A Dent, K Faust, KHB Lam, N Alhangari, AJ Leon… - medRxiv, 2023 - medrxiv.org
Intra-tumoral heterogeneity can wreak havoc on current precision medicine strategies due to
challenges in sufficient sampling of geographically separated areas of biodiversity …

Rewiring Drug Research and Development through Human Data-Driven Discovery (HD3)

DB Jackson, R Racz, S Kim, S Brock, K Burkhart - Pharmaceutics, 2023 - mdpi.com
In an era of unparalleled technical advancement, the pharmaceutical industry is struggling to
transform data into increased research and development efficiency, and, as a corollary, new …

Depletion of chitinase-3-like protein 1 (CHI3L1) in glioma cells restraints tumor growth and affects neovasculature in intracranial murine gliomas

B Kaminska, S Cyranowski, M Ghosh, B Wojtas… - 2023 - researchsquare.com
Abstract Chitinase-3-like protein 1 (CHI3L1) is a secreted, non-enzymatic glycoprotein that
binds proteins and carbohydrates and interacts with cell-surface and extracellular-matrix …

Development of Nanoflow High-Pressure Liquid Chromatography–Mass Spectrometry Methodologies and Application for Glycomic Biomarker Discovery

RL Schindler - 2024 - search.proquest.com
Glycosylation is a keystone of mammalian cells found primarily on membrane proteins and
lipids, extending into the extracellular space to form the outer-most membrane layer known …