T cell receptor therapeutics: immunological targeting of the intracellular cancer proteome

CA Klebanoff, SS Chandran, BM Baker… - Nature Reviews Drug …, 2023 - nature.com
The T cell receptor (TCR) complex is a naturally occurring antigen sensor that detects,
amplifies and coordinates cellular immune responses to epitopes derived from cell surface …

Gaussian accelerated molecular dynamics: Principles and applications

J Wang, PR Arantes, A Bhattarai… - Wiley …, 2021 - Wiley Online Library
Gaussian accelerated molecular dynamics (GaMD) is a robust computational method for
simultaneous unconstrained enhanced sampling and free energy calculations of …

[HTML][HTML] Scalable molecular dynamics on CPU and GPU architectures with NAMD

JC Phillips, DJ Hardy, JDC Maia, JE Stone… - The Journal of …, 2020 - pubs.aip.org
NAMD is a molecular dynamics program designed for high-performance simulations of very
large biological objects on CPU-and GPU-based architectures. NAMD offers scalable …

Human leukocyte antigen susceptibility map for severe acute respiratory syndrome coronavirus 2

A Nguyen, JK David, SK Maden, MA Wood… - Journal of …, 2020 - Am Soc Microbiol
Genetic variability across the three major histocompatibility complex (MHC) class I genes
(human leukocyte antigen A [HLA-A],-B, and-C genes) may affect susceptibility to and …

Checkpoint blockade and nanosonosensitizer-augmented noninvasive sonodynamic therapy combination reduces tumour growth and metastases in mice

W Yue, L Chen, L Yu, B Zhou, H Yin, W Ren… - Nature …, 2019 - nature.com
Combined checkpoint blockade (eg, PD1/PD-L1) with traditional clinical therapies can be
hampered by side effects and low tumour-therapeutic outcome, hindering broad clinical …

Tumour circular RNAs elicit anti-tumour immunity by encoding cryptic peptides

D Huang, X Zhu, S Ye, J Zhang, J Liao, N Zhang… - Nature, 2024 - nature.com
Emerging data have shown that previously defined noncoding genomes might encode
peptides that bind human leukocyte antigen (HLA) as cryptic antigens to stimulate adaptive …

Tuning T cell receptor sensitivity through catch bond engineering

X Zhao, EM Kolawole, W Chan, Y Feng, X Yang… - Science, 2022 - science.org
Adoptive cell therapy using engineered T cell receptors (TCRs) is a promising approach for
targeting cancer antigens, but tumor-reactive TCRs are often weakly responsive to their …

TCR recognition of peptide–MHC-I: Rule makers and breakers

C Szeto, CA Lobos, AT Nguyen, S Gras - International journal of …, 2020 - mdpi.com
T cells are a critical part of the adaptive immune system that are able to distinguish between
healthy and unhealthy cells. Upon recognition of protein fragments (peptides), activated T …

Multiple signaling roles of CD3ε and its application in CAR-T cell therapy

W Wu, Q Zhou, T Masubuchi, X Shi, H Li, X Xu… - Cell, 2020 - cell.com
AT cell receptor (TCR) mediates antigen-induced signaling through its associated CD3ε, δ,
γ, and ζ, but the contributions of different CD3 chains remain elusive. Using quantitative …

Global analysis of shared T cell specificities in human non-small cell lung cancer enables HLA inference and antigen discovery

SH Chiou, D Tseng, A Reuben, V Mallajosyula… - Immunity, 2021 - cell.com
To identify disease-relevant T cell receptors (TCRs) with shared antigen specificity, we
analyzed 778,938 TCRβ chain sequences from 178 non-small cell lung cancer patients …