Targeted capture in evolutionary and ecological genomics
The rapid expansion of next‐generation sequencing has yielded a powerful array of tools to
address fundamental biological questions at a scale that was inconceivable just a few years …
address fundamental biological questions at a scale that was inconceivable just a few years …
Genomic selection for forest tree improvement: Methods, achievements and perspectives
VG Lebedev, TN Lebedeva, AI Chernodubov… - Forests, 2020 - mdpi.com
The breeding of forest trees is only a few decades old, and is a much more complicated,
longer, and expensive endeavor than the breeding of agricultural crops. One breeding cycle …
longer, and expensive endeavor than the breeding of agricultural crops. One breeding cycle …
Genotype by environment interactions in forest tree breeding: review of methodology and perspectives on research and application
Genotype by environment interaction (G× E) refers to the comparative performances of
genotypes differing among environments, representing differences in genotype rankings or …
genotypes differing among environments, representing differences in genotype rankings or …
Biological invasions, climate change, and genomics
Biological invasions constitute a major environmental change driver, affecting conservation,
agriculture and human health. Invasive alien species (IAS) impacts include, alterations of …
agriculture and human health. Invasive alien species (IAS) impacts include, alterations of …
Using nuclear gene data for plant phylogenetics: Progress and prospects II. Next‐gen approaches
Single and low copy nuclear genes offer a larger number of, and more rapidly evolving,
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
A target enrichment method for gathering phylogenetic information from hundreds of loci: an example from the Compositae
• Premise of the study: The Compositae (Asteraceae) are a large and diverse family of
plants, and the most comprehensive phylogeny to date is a meta‐tree based on 10 …
plants, and the most comprehensive phylogeny to date is a meta‐tree based on 10 …
Cisgenesis and genome editing: combining concepts and efforts for a smarter use of genetic resources in crop breeding
T Cardi - Plant Breeding, 2016 - Wiley Online Library
Plant genetic resources (PGR) represent valuable sources of genetic variability for crop
breeding. The development of novel biotechnologies is necessary for increasing the …
breeding. The development of novel biotechnologies is necessary for increasing the …
Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms
C Gasc, E Peyretaillade, P Peyret - Nucleic Acids Research, 2016 - academic.oup.com
The recent expansion of next-generation sequencing has significantly improved biological
research. Nevertheless, deep exploration of genomes or metagenomic samples remains …
research. Nevertheless, deep exploration of genomes or metagenomic samples remains …
Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae)
Hybridization is a frequent and important force in plant evolution. Next-generation
sequencing (NGS) methods offer new possibilities for clade resolution and ambitious …
sequencing (NGS) methods offer new possibilities for clade resolution and ambitious …
Efficiency of genomic prediction across two Eucalyptus nitens seed orchards with different selection histories
Genomic selection is expected to enhance the genetic improvement of forest tree species by
providing more accurate estimates of breeding values through marker-based relationship …
providing more accurate estimates of breeding values through marker-based relationship …