Rice functional genomics: decades' efforts and roads ahead
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …
rice reference genome sequences, tremendous progress has been achieved in …
Plant and animal small RNA communications between cells and organisms
Since the discovery of eukaryotic small RNAs as the main effectors of RNA interference in
the late 1990s, diverse types of endogenous small RNAs have been characterized, most …
the late 1990s, diverse types of endogenous small RNAs have been characterized, most …
Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA
X Zhao, J Li, B Lian, H Gu, Y Li, Y Qi - Nature communications, 2018 - nature.com
Long non-coding RNAs (lncRNAs) have emerged as important regulators of gene
expression and plant development. Here, we identified 6,510 lncRNAs in Arabidopsis under …
expression and plant development. Here, we identified 6,510 lncRNAs in Arabidopsis under …
Male sterility and fertility restoration in crops
L Chen, YG Liu - Annual review of plant biology, 2014 - annualreviews.org
In plants, male sterility can be caused either by mitochondrial genes with coupled nuclear
genes or by nuclear genes alone; the resulting conditions are known as cytoplasmic male …
genes or by nuclear genes alone; the resulting conditions are known as cytoplasmic male …
Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype–phenotype relationships and its relevance to crop …
JN Cobb, G DeClerck, A Greenberg, R Clark… - Theoretical and Applied …, 2013 - Springer
More accurate and precise phenotyping strategies are necessary to empower high-
resolution linkage mapping and genome-wide association studies and for training genomic …
resolution linkage mapping and genome-wide association studies and for training genomic …
Molecular control of male fertility for crop hybrid breeding
YJ Kim, D Zhang - Trends in Plant Science, 2018 - cell.com
In many plant species, male-sterile female lines with cytoplasmic male sterility (CMS) or
nuclear-controlled environment-sensitive genic male sterility (EGMS) have long been used …
nuclear-controlled environment-sensitive genic male sterility (EGMS) have long been used …
Development of Commercial Thermo-sensitive Genic Male Sterile Rice Accelerates Hybrid Rice Breeding Using the CRISPR/Cas9-mediated TMS5 Editing System
Hybrid rice breeding offers an important strategy to improve rice production, in which the
cultivation of a male sterile line is the key to the success of cross-breeding. CRISPR/Cas9 …
cultivation of a male sterile line is the key to the success of cross-breeding. CRISPR/Cas9 …
PhasiRNAs in plants: their biogenesis, genic sources, and roles in stress responses, development, and reproduction
Phased secondary small interfering RNAs (phasiRNAs) constitute a major category of small
RNAs in plants, but most of their functions are still poorly defined. Some phasiRNAs, known …
RNAs in plants, but most of their functions are still poorly defined. Some phasiRNAs, known …
Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks
Plant genomes are the source of large numbers of small RNAs, generated via a variety of
genetically separable pathways. Several of these pathways converge in the production of …
genetically separable pathways. Several of these pathways converge in the production of …
PMS1T, producing phased small-interfering RNAs, regulates photoperiod-sensitive male sterility in rice
Y Fan, J Yang, SM Mathioni, J Yu… - Proceedings of the …, 2016 - National Acad Sciences
Phased small-interfering RNAs (phasiRNAs) are a special class of small RNAs, which are
generated in 21-or 24-nt intervals from transcripts of precursor RNAs. Although phasiRNAs …
generated in 21-or 24-nt intervals from transcripts of precursor RNAs. Although phasiRNAs …