[HTML][HTML] An explainable framework for drug repositioning from disease information network

C He, L Duan, H Zheng, L Song, M Huang - Neurocomputing, 2022 - Elsevier
Exploring efficient and high-accuracy computational drug repositioning methods has
become a popular and attractive topic in drug development. This technology can …

Predicting associations among drugs, targets and diseases by tensor decomposition for drug repositioning

R Wang, S Li, L Cheng, MH Wong, KS Leung - BMC bioinformatics, 2019 - Springer
Background Development of new drugs is a time-consuming and costly process, and the
cost is still increasing in recent years. However, the number of drugs approved by FDA every …

A review of recent developments and progress in computational drug repositioning

W Shi, X Chen, L Deng - Current Pharmaceutical Design, 2020 - ingentaconnect.com
Computational drug repositioning is an efficient approach towards discovering new
indications for existing drugs. In recent years, with the accumulation of online health-related …

Learning representations to predict intermolecular interactions on large-scale heterogeneous molecular association network

HC Yi, ZH You, DS Huang, ZH Guo, KCC Chan, Y Li - Iscience, 2020 - cell.com
Molecular components that are functionally interdependent in human cells constitute
molecular association networks. Disease can be caused by disturbance of multiple …

Data integration using tensor decomposition for the prediction of miRNA-disease associations

JW Luo, Y Liu, P Liu, Z Lai, H Wu - IEEE Journal of Biomedical …, 2021 - ieeexplore.ieee.org
Dysfunction of miRNAs has an important relationship with diseases by impacting their target
genes. Identifying disease-related miRNAs is of great significance to prevent and treat …

Learning data-driven drug-target-disease interaction via neural tensor network

H Chen, J Li - International joint conference on artificial intelligence …, 2020 - par.nsf.gov
Precise medicine recommendations provide more effective treatments and cause fewer drug
side effects. A key step is to understand the mechanistic relationships among drugs, targets …

Learning multi-scale heterogeneous representations and global topology for drug-target interaction prediction

P Xuan, K Hu, H Cui, T Zhang… - IEEE Journal of …, 2021 - ieeexplore.ieee.org
Identification of interactions between drugs and target proteins plays a critical role not only in
drug discovery but also in drug repositioning. Deep integration of inter-connections and intra …

miRCom: tensor completion integrating multi-view information to deduce the potential disease-related miRNA-miRNA pairs

P Liu, J Luo, X Chen - IEEE/ACM Transactions on …, 2020 - ieeexplore.ieee.org
MicroRNAs (miRNAs) are consistently capable of regulating gene expression synergistically
in a combination mode and play a key role in various biological processes associated with …

ALDPI: adaptively learning importance of multi-scale topologies and multi-modality similarities for drug–protein interaction prediction

K Hu, H Cui, T Zhang, C Sun… - Briefings in …, 2022 - academic.oup.com
Motivation Effective computational methods to predict drug–protein interactions (DPIs) are
vital for drug discovery in reducing the time and cost of drug development. Recent DPI …

NTD-DR: Nonnegative tensor decomposition for drug repositioning

AA Jamali, Y Tan, A Kusalik, FX Wu - Plos one, 2022 - journals.plos.org
Computational drug repositioning aims to identify potential applications of existing drugs for
the treatment of diseases for which they were not designed. This approach can considerably …