[PDF][PDF] Some new directions in control theory inspired by systems biology

ED Sontag - Systems biology, 2004 - academia.edu
This paper, addressed primarily to engineers and mathematicians with an interest in control
theory, argues that entirely new theoretical problems arise naturally when addressing …

Observability of complex systems

YY Liu, JJ Slotine, AL Barabási - Proceedings of the …, 2013 - National Acad Sciences
A quantitative description of a complex system is inherently limited by our ability to estimate
the system's internal state from experimentally accessible outputs. Although the …

Critical evaluation of extended Kalman filtering and moving-horizon estimation

EL Haseltine, JB Rawlings - Industrial & engineering chemistry …, 2005 - ACS Publications
State estimators for physical processes often must address different challenges, including
nonlinear dynamics, states subject to hard constraints (eg, nonnegative concentrations), and …

Particle filtering and moving horizon estimation

JB Rawlings, BR Bakshi - Computers & chemical engineering, 2006 - Elsevier
This paper provides an overview of currently available methods for state estimation of linear,
constrained and nonlinear systems. The following methods are discussed: Kalman filtering …

Multiple equilibria in complex chemical reaction networks: I. The injectivity property

G Craciun, M Feinberg - SIAM Journal on Applied Mathematics, 2005 - SIAM
The capacity for multiple equilibria in an isothermal homogeneous continuous flow stirred
tank reactor is determined by the reaction network. Examples show that there is a very …

Structure and stability of certain chemical networks and applications to the kinetic proofreading model of T-cell receptor signal transduction

ED Sontag - IEEE transactions on automatic control, 2001 - ieeexplore.ieee.org
Deals with the theory of structure, stability, robustness, and stabilization for an appealing
class of nonlinear systems which arises in the analysis of chemical networks. The results …

Molecular systems biology and control

ED Sontag - European journal of control, 2005 - Elsevier
This paper, prepared for a tutorial at the 2005 IEEE Conference on Decision and Control,
presents an introduction to molecular systems biology and some associated problems in …

State estimation for linear and non-linear equality-constrained systems

BOS Teixeira, J Chandrasekar, LAB Tôrres… - … Journal of Control, 2009 - Taylor & Francis
This article addresses the state-estimation problem for linear and non-linear systems for the
case in which prior knowledge is available in the form of an equality constraint. The equality …

Monotone chemical reaction networks

PD Leenheer, D Angeli, ED Sontag - Journal of mathematical chemistry, 2007 - Springer
We analyze certain chemical reaction networks and show that every solution converges to
some steady state. The reaction kinetics are assumed to be monotone but otherwise …

Data-driven approximations of dynamical systems operators for control

E Kaiser, JN Kutz, SL Brunton - The Koopman operator in systems and …, 2020 - Springer
Abstract The Koopman and Perron Frobenius transport operators are fundamentally
changing how we approach dynamical systems, providing linear representations for even …