Methodology-centered review of molecular modeling, simulation, and prediction of SARS-CoV-2

K Gao, R Wang, J Chen, L Cheng, J Frishcosy… - Chemical …, 2022 - ACS Publications
Despite tremendous efforts in the past two years, our understanding of severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2), virus–host interactions, immune …

Virus irradiation and COVID-19 disease

M Durante, K Schulze, S Incerti, Z Francis, S Zein… - Frontiers in …, 2020 - frontiersin.org
Virus irradiation has been performed for many decades for basic research studies,
sterilization, and vaccine development. The COVID-19 outbreak is currently causing an …

Atmospheric pressure mass spectrometry of single viruses and nanoparticles by nanoelectromechanical systems

RT Erdogan, M Alkhaled, BE Kaynak, H Alhmoud… - Acs Nano, 2022 - ACS Publications
Mass spectrometry of intact nanoparticles and viruses can serve as a potent characterization
tool for material science and biophysics. Inaccessible by widespread commercial …

Influenza Virus Inactivated by Heavy Ion Beam Irradiation Stimulates Antigen-Specific Immune Responses

K Schulze, U Weber, C Schuy, M Durante, CA Guzmán - Pharmaceutics, 2024 - mdpi.com
The COVID-19 pandemic has made clear the need for effective and rapid vaccine
development methods. Conventional inactivated virus vaccines, together with new …

Inactivation of SARS-CoV-2 by charged particles for future vaccine production applications: a Monte Carlo study

P Rafiepour, S Sina, SMJ Mortazavi - Radiation Physics and Chemistry, 2022 - Elsevier
The world is still suffering from the SARS-CoV-2 pandemic, and the number of infected
people is still growing in many countries in 2022. Although great strides have been made to …

Increased efficiency of radiation inactivation of virions by gold nanoparticles

NA Nikitin, MV Arkhipenko… - Particle & Particle …, 2022 - Wiley Online Library
Gold nanoparticles (GNPs) are promising radiosensitizers for cancer radiotherapy.
Moreover, they can be used in the same way for radiation processing and sterilization. Such …

A multiscale Monte Carlo simulation of irradiating a typical-size apple by low-energy X-rays and electron beams

P Rafiepour, S Sina, SMJ Mortazavi - Radiation Physics and Chemistry, 2023 - Elsevier
Irradiation of foods and fruits by ionizing radiation effectively eliminates pathogenic
microorganisms primarily present on the surface. Recently, much attention has been paid to …

Fast ion-beam inactivation of viruses, where radiation track structure meets RNA structural biology

B Villagomez-Bernabe, SW Chan… - Radiation …, 2022 - meridian.allenpress.com
Here we show an interplay between the structures present in ionization tracks and
nucleocapsid RNA structural biology, using fast ion-beam inactivation of the severe acute …

[HTML][HTML] Dose absorption of Omicron variant SARS-CoV-2 by electron radiation: Using Geant4-DNA toolkit

MJ Torkamani, C Karami, P Sayyah-Koohi… - Nuclear Engineering …, 2024 - Elsevier
In this research, the Omicron variant of the SARS-CoV-2 virus was simulated and exposed to
electron radiation with up to 20 keV energy. Absorbed energy was measured for spike …

A mechanistic simulation of induced DNA damage in a bacterial cell by X-and gamma rays: a parameter study

P Rafiepour, S Sina, ZA Amoli… - … Engineering Sciences in …, 2024 - Springer
Abstract Mechanistic Monte Carlo simulations calculating DNA damage caused by ionizing
radiation are highly dependent on the simulation parameters. In the present study, using the …