T cell responses to SARS-CoV-2

A Sette, J Sidney, S Crotty - Annual review of immunology, 2023 - annualreviews.org
A large body of evidence generated in the last two and a half years addresses the roles of T
cells in SARS-CoV-2 infection and following vaccination. Infection or vaccination induces …

Mutation bias and the predictability of evolution

AV Cano, BL Gitschlag… - … of the Royal …, 2023 - royalsocietypublishing.org
Predicting evolutionary outcomes is an important research goal in a diversity of contexts.
The focus of evolutionary forecasting is usually on adaptive processes, and efforts to …

Association of cellular immunity with severity of COVID-19 from the perspective of antigen-specific memory T cell responses and cross-reactivity

S Fujii, S Yamasaki, T Iyoda, K Shimizu - Inflammation and Regeneration, 2022 - Springer
Coronaviruses regularly cause outbreaks of zoonotic diseases characterized by severe
pneumonia. The new coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS …

Superior humoral immunity in vaccinated SARS-CoV-2 convalescence as compared to SARS-COV-2 infection or vaccination

K Paniskaki, MJ Konik, M Anft, TL Meister… - Frontiers in …, 2022 - frontiersin.org
Emerging variants of concern (VOC) raise obstacles in shaping vaccination strategies and
ending the pandemic. Vaccinated SARS-CoV-2 convalescence shapes the current immune …

Alterations in SARS-CoV-2 Omicron and Delta peptides presentation by HLA molecules

S Nersisyan, A Zhiyanov, M Zakharova, I Ishina… - PeerJ, 2022 - peerj.com
The T-cell immune response is a major determinant of effective SARS-CoV-2 clearance.
Here, using the recently developed T-CoV bioinformatics pipeline (https://t-cov. hse. ru) we …

The Influence of Cross-Reactive T Cells in COVID-19

PJ Eggenhuizen, JD Ooi - Biomedicines, 2024 - mdpi.com
Memory T cells form from the adaptive immune response to historic infections or
vaccinations. Some memory T cells have the potential to recognise unrelated pathogens like …

On the peptide binding affinity changes in population-specific HLA repertoires to the SARS-CoV-2 variants Delta and Omicron

LC Chen, S Nersisyan, CJ Wu, CM Chang… - Journal of …, 2022 - Elsevier
Objective To investigate the changes of Spike protein-HLA binding affinity profiles between
the Wuhan strain and two dominant variants, the Delta and the Omicron strains, among the …

Cellular therapies for the treatment and prevention of SARS-CoV-2 infection

SR Conway, MD Keller… - Blood, The Journal of the …, 2022 - ashpublications.org
Patients with blood disorders who are immune suppressed are at increased risk for infection
with severe acute respiratory syndrome coronavirus 2. Sequelae of infection can include …

Machine learning-enhanced immunopeptidomics applied to T-cell epitope discovery for COVID-19 vaccines

KA Kovalchik, DJ Hamelin, P Kubiniok… - Nature …, 2024 - nature.com
Next-generation T-cell-directed vaccines for COVID-19 focus on establishing lasting T-cell
immunity against current and emerging SARS-CoV-2 variants. Precise identification of …

The role of HLA genotypes in understanding the pathogenesis of severe COVID-19

F Arab, S Mollazadeh, F Ghayourbabaei… - Egyptian Journal of …, 2023 - Springer
Abstract The coronavirus disease 2019 (COVID-19) pandemic has caused human tragedy
through the global spread of the viral pathogen SARS-CoV-2. Although the underlying …