Multi-omics research in sarcopenia: current progress and future prospects

JC Liu, SS Dong, H Shen, DY Yang, BB Chen… - Ageing Research …, 2022 - Elsevier
Sarcopenia is a systemic disease with progressive and generalized skeletal muscle
dysfunction defined by age-related low muscle mass, high content of muscle slow fibers, and …

A compendium of promoter-centered long-range chromatin interactions in the human genome

I Jung, A Schmitt, Y Diao, AJ Lee, T Liu, D Yang… - Nature …, 2019 - nature.com
A large number of putative cis-regulatory sequences have been annotated in the human
genome, but the genes they control remain poorly defined. To bridge this gap, we generate …

Distinct subtypes of polycystic ovary syndrome with novel genetic associations: An unsupervised, phenotypic clustering analysis

M Dapas, FTJ Lin, GN Nadkarni, R Sisk, RS Legro… - PLoS …, 2020 - journals.plos.org
Background Polycystic ovary syndrome (PCOS) is a common, complex genetic disorder
affecting up to 15% of reproductive-age women worldwide, depending on the diagnostic …

Shared genetic risk factors and causal association between psoriasis and coronary artery disease

MT Patrick, Q Li, R Wasikowski, N Mehta… - Nature …, 2022 - nature.com
Psoriasis and coronary artery disease (CAD) are related comorbidities that are well
established, but whether a genetic basis underlies this is not well studied. We apply trans …

[HTML][HTML] From DNA human sequence to the chromatin higher order organisation and its biological meaning: using biomolecular interaction networks to understand the …

M Chiliński, K Sengupta, D Plewczynski - Seminars in cell & developmental …, 2022 - Elsevier
The three-dimensional structure of the human genome has been proven to have a
significant functional impact on gene expression. The high-order spatial chromatin is …

A noncoding single-nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation

C Yanchus, KL Drucker, TM Kollmeyer, R Tsai… - Science, 2022 - science.org
Establishing causal links between inherited polymorphisms and cancer risk is challenging.
Here, we focus on the single-nucleotide polymorphism rs55705857, which confers a sixfold …

The 2018 Nucleic Acids Research database issue and the online molecular biology database collection

DJ Rigden, XM Fernández - Nucleic acids research, 2018 - academic.oup.com
Abstract The 2018 Nucleic Acids Research Database Issue contains 181 papers spanning
molecular biology. Among them, 82 are new and 84 are updates describing resources that …

Risk SNP-Mediated Enhancer–Promoter Interaction Drives Colorectal Cancer through Both FADS2 and AP002754.2

J Tian, J Lou, Y Cai, M Rao, Z Lu, Y Zhu, D Zou, X Peng… - Cancer research, 2020 - AACR
Although genome-wide association studies (GWAS) have identified more than 100
colorectal cancer risk loci, most of the biological mechanisms associated with these loci …

[HTML][HTML] Spatial and clonality-resolved 3D cancer genome alterations reveal enhancer-hijacking as a potential prognostic marker for colorectal cancer

K Kim, M Kim, AJ Lee, SH Song, JK Kang, J Eom… - Cell Reports, 2023 - cell.com
The regulatory effect of non-coding large-scale structural variations (SVs) on proto-
oncogene activation remains unclear. This study investigated SV-mediated gene …

Differential methylation of enhancer at IGF2 is associated with abnormal dopamine synthesis in major psychosis

S Pai, P Li, B Killinger, L Marshall, P Jia, J Liao… - Nature …, 2019 - nature.com
Impaired neuronal processes, including dopamine imbalance, are central to the
pathogenesis of major psychosis, but the molecular origins are unclear. Here we perform a …