Protein-coding genes' retrocopies and their functions

MR Kubiak, I Makałowska - Viruses, 2017 - mdpi.com
Transposable elements, often considered to be not important for survival, significantly
contribute to the evolution of transcriptomes, promoters, and proteomes. Reverse …

Cancer, retrogenes, and evolution

K Staszak, I Makałowska - Life, 2021 - mdpi.com
This review summarizes the knowledge about retrogenes in the context of cancer and
evolution. The retroposition, in which the processed mRNA from parental genes undergoes …

Mobile elements contribute to the uniqueness of human genome with 15,000 human-specific insertions and 14 Mbp sequence increase

W Tang, S Mun, A Joshi, K Han, P Liang - DNA Research, 2018 - academic.oup.com
Mobile elements (MEs) collectively contribute to at least 50% of the human genome. Due to
their past incremental accumulation and ongoing DNA transposition, MEs serve as a …

Recent, full-length gene retrocopies are common in canids

K Batcher, S Varney, D York, M Blacksmith… - Genome …, 2022 - genome.cshlp.org
Gene retrocopies arise from the reverse transcription and insertion into the genome of
processed mRNA transcripts. Although many retrocopies have acquired mutations that …

RetrogeneDB–a database of plant and animal retrocopies

W Rosikiewicz, M Kabza, JG Kosiński… - Database, 2017 - academic.oup.com
For a long time, retrocopies were considered 'junk DNA', but numerous studies have shown
that retrocopies may gain functionality and become so-called retrogenes. Retrogenes may …

Tracing the origin and evolutionary fate of recent gene retrocopies in natural populations of the house mouse

W Zhang, D Tautz - Molecular Biology and Evolution, 2022 - academic.oup.com
Although the contribution of retrogenes to the evolution of genes and genomes has long
been recognized, the evolutionary patterns of very recently derived retrocopies that are still …

[HTML][HTML] Evolution of retrocopies in the context of HUSH silencing

J Kozłowska-Masłoń… - Biology …, 2024 - biologydirect.biomedcentral.com
Retrotransposition is one of the main factors responsible for gene duplication and thus
genome evolution. However, the sequences that undergo this process are not only an …

Genome-wide comparison of allele-specific gene expression between African and European populations

L Tian, A Khan, Z Ning, K Yuan, C Zhang… - Human molecular …, 2018 - academic.oup.com
Transcriptomic diversity across human populations reflects differential regulatory
mechanisms. Allelic-imbalanced gene expression is a genetic regulatory mechanism that …

[HTML][HTML] Interpopulation differences of retroduplication variations (RDVs) in rice retrogenes and their phenotypic correlations

H Zeng, X Chen, H Li, J Zhang, Z Wei… - Computational and …, 2021 - Elsevier
Retroduplication variation (RDV), a type of retrocopy polymorphism, is considered to have
essential biological significance, but its effect on gene function and species phenotype is still …

Emergence and evolution of inter-specific segregating retrocopies in cynomolgus monkey (Macaca fascicularis) and rhesus macaque (Macaca mulatta)

X Zhang, Q Zhang, B Su - Scientific Reports, 2016 - nature.com
Retroposition is an RNA-mediated mechanism to generate gene duplication, and is believed
to play an important role in genome evolution and phenotypic adaptation in various species …