Comparing de novo genome assembly: the long and short of it

G Narzisi, B Mishra - PloS one, 2011 - journals.plos.org
Recent advances in DNA sequencing technology and their focal role in Genome Wide
Association Studies (GWAS) have rekindled a growing interest in the whole-genome …

Hamiltonian laceability of bubble-sort graphs with edge faults

T Araki, Y Kikuchi - Information Sciences, 2007 - Elsevier
It is known that the n-dimensional bubble-sort graph Bn is bipartite,(n− 1)-regular, and has n!
vertices. We first show that, for any vertex v, Bn− v has a hamiltonian path between any two …

The 1-fixed-endpoint path cover problem is polynomial on interval graphs

K Asdre, SD Nikolopoulos - Algorithmica, 2010 - Springer
We consider a variant of the path cover problem, namely, the k-fixed-endpoint path cover
problem, or k PC for short, on interval graphs. Given a graph G and a subset T of k vertices of …

Flow shop scheduling problem with conflict graphs

NEH Tellache, M Boudhar - Annals of Operations Research, 2018 - Springer
This paper addresses the problem of scheduling jobs on flow shops subject to constraints
given by an undirected graph, in which each edge joins a pair of conflicting jobs that cannot …

Revisiting path-type covering and partitioning problems

P Manuel - arXiv preprint arXiv:1807.10613, 2018 - arxiv.org
Covering problems belong to the foundation of graph theory. There are several types of
covering problems in graph theory such as covering the vertex set by stars (domination …

[PDF][PDF] Constructing two edge-disjoint Hamiltonian cycles and two-equal path cover in augmented cubes

RW Hung - IAENG Intern. J. Comput. Sci, 2012 - iaeng.org
The n-dimensional hypercube network Qn is one of the most popular interconnection
networks since it has simple structure and is easy to implement. The n-dimensional …

Two-machine flow shop problem with unit-time operations and conflict graph

NEH Tellache, M Boudhar - International Journal of Production …, 2017 - Taylor & Francis
This paper addresses the problem of scheduling, on a two-machine flow shop, a set of unit-
time operations subject to the constraints that some conflicting jobs cannot be scheduled …

Isomorphic coupled-task scheduling problem with compatibility constraints on a single processor

G Simonin, B Darties, R Giroudeau, JC König - Journal of Scheduling, 2011 - Springer
The problem presented in this paper is a generalization of the usual coupled-tasks
scheduling problem in presence of compatibility constraints. The reason behind this study is …

[HTML][HTML] Finding a minimum path cover of a distance-hereditary graph in polynomial time

RW Hung, MS Chang - Discrete Applied Mathematics, 2007 - Elsevier
A path cover of a graph G=(V, E) is a set of pairwise vertex-disjoint paths such that the
disjoint union of the vertices of these paths equals the vertex set V of G. The path cover …

A linear‐time algorithm for the k‐fixed‐endpoint path cover problem on cographs

K Asdre, SD Nikolopoulos - Networks: An International Journal, 2007 - Wiley Online Library
In this paper, we study a variant of the path cover problem, namely, the k‐fixed‐endpoint
path cover problem. Given a graph G and a subset \calT of k vertices of V (G), ak‐fixed …