A starting guide to root ecology: strengthening ecological concepts and standardising root classification, sampling, processing and trait measurements

GT Freschet, L Pagès, CM Iversen, LH Comas… - New …, 2021 - Wiley Online Library
In the context of a recent massive increase in research on plant root functions and their
impact on the environment, root ecologists currently face many important challenges to keep …

[HTML][HTML] Crop phenomics and high-throughput phenotyping: past decades, current challenges, and future perspectives

W Yang, H Feng, X Zhang, J Zhang, JH Doonan… - Molecular plant, 2020 - cell.com
Since whole-genome sequencing of many crops has been achieved, crop functional
genomics studies have stepped into the big-data and high-throughput era. However …

RhizoVision Explorer: Open-source software for root image analysis and measurement standardization

A Seethepalli, K Dhakal, M Griffiths, H Guo… - AoB plants, 2021 - academic.oup.com
Roots are central to the function of natural and agricultural ecosystems by driving plant
acquisition of soil resources and influencing the carbon cycle. Root characteristics like …

[HTML][HTML] Uncovering the hidden half of plants using new advances in root phenotyping

JA Atkinson, MP Pound, MJ Bennett… - Current opinion in …, 2019 - Elsevier
Highlights•A 'second green revolution'using crops with improved below-ground traits is
needed.•Phenotyping plant roots poses practical and data challenges.•Technologies for 2D …

Future scenarios for plant phenotyping

F Fiorani, U Schurr - Annual review of plant biology, 2013 - annualreviews.org
With increasing demand to support and accelerate progress in breeding for novel traits, the
plant research community faces the need to accurately measure increasingly large numbers …

[HTML][HTML] Root traits and phenotyping strategies for plant improvement

A Paez-Garcia, CM Motes, WR Scheible, R Chen… - Plants, 2015 - mdpi.com
Roots are crucial for nutrient and water acquisition and can be targeted to enhance plant
productivity under a broad range of growing conditions. A current challenge for plant …

[HTML][HTML] Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype–phenotype relationships and its relevance to crop …

JN Cobb, G DeClerck, A Greenberg, R Clark… - Theoretical and Applied …, 2013 - Springer
More accurate and precise phenotyping strategies are necessary to empower high-
resolution linkage mapping and genome-wide association studies and for training genomic …

[HTML][HTML] Azospirillum brasilense promotes increases in growth and nitrogen use efficiency of maize genotypes

DM Zeffa, LJ Perini, MB Silva, NV de Sousa… - Plos one, 2019 - journals.plos.org
The development of cultivars with an improved nitrogen use efficiency (NUE) together with
the application of plant growth-promoting bacteria is considered one of the main strategies …

Cell to whole-plant phenotyping: the best is yet to come

S Dhondt, N Wuyts, D Inzé - Trends in plant science, 2013 - cell.com
Imaging and image processing have revolutionized plant phenotyping and are now a major
tool for phenotypic trait measurement. Here we review plant phenotyping systems by …

Plant phenomics: An overview of image acquisition technologies and image data analysis algorithms

F Perez-Sanz, PJ Navarro, M Egea-Cortines - GigaScience, 2017 - academic.oup.com
The study of phenomes or phenomics has been a central part of biology. The field of
automatic phenotype acquisition technologies based on images has seen an important …